RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 AMTNQ6UX39 209 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 Q8NAQ8 132 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 SAT2Q96F10 170 aaPredicted RBP13.56□□□□□ -0.24
CDH11-206ENST00000562998 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
CDH11-206ENST00000562998 HRH4Q9H3N8 390 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 ZNF331Q9NQX6 463 aaPredicted RBP13.56□□□□□ -0.24
CDH11-206ENST00000562998 X6R8D5 127 aa13.56□□□□□ -0.24
CDH11-206ENST00000562998 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
CDH11-206ENST00000562998 H3BQ15 152 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 HLA-DMBP28068 263 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 FGL1Q08830 312 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 Q5BKY6 102 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 LCN15Q6UWW0 184 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 C1QTNF4Q9BXJ3 329 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 WFDC1Q9HC57 220 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 CLEC5AQ9NY25 188 aa13.55□□□□□ -0.24
CDH11-206ENST00000562998 PSG3Q16557 428 aa13.54□□□□□ -0.24
CDH11-206ENST00000562998 SLC50A1Q9BRV3 221 aa13.54□□□□□ -0.24
CDH11-206ENST00000562998 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
CDH11-206ENST00000562998 XCL2Q9UBD3 114 aa13.54□□□□□ -0.24
CDH11-206ENST00000562998 SLC17A3O00476 420 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 PSG9Q00887 426 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
CDH11-206ENST00000562998 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 FAM167A-AS1Q96KT0 104 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 AQP10Q96PS8 301 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 SLC35B3Q9H1N7 401 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 KCNIP2Q9NS61 270 aa13.53□□□□□ -0.24
CDH11-206ENST00000562998 SNRPCP09234 159 aaKnown RBP13.52□□□□□ -0.25
CDH11-206ENST00000562998 CNN1P51911 297 aaKnown RBP13.52□□□□□ -0.25
CDH11-206ENST00000562998 GUK1Q16774 197 aa13.52□□□□□ -0.25
CDH11-206ENST00000562998 SMIM3Q9BZL3 60 aa13.52□□□□□ -0.25
CDH11-206ENST00000562998 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.25
CDH11-206ENST00000562998 RYR3Q15413 4870 aa13.52□□□□□ -0.25
CDH11-206ENST00000562998 ZNF705FA8MVS1 300 aaPredicted RBP13.51□□□□□ -0.25
CDH11-206ENST00000562998 C17orf112F2Z3M2 114 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 ZNF253O75346 499 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
CDH11-206ENST00000562998 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
CDH11-206ENST00000562998 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
CDH11-206ENST00000562998 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 MIFP14174 115 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 RBMY1FQ15415 496 aaKnown RBP13.51□□□□□ -0.25
CDH11-206ENST00000562998 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 LYSTQ99698 3801 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 SLC25A2Q9BXI2 301 aa13.51□□□□□ -0.25
CDH11-206ENST00000562998 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 IGHV4-28A0A0C4DH34 117 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 G3V3Q6 166 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 H3BTX0 84 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 DUSP14O95147 198 aaKnown RBP13.5□□□□□ -0.25
CDH11-206ENST00000562998 IFNA5P01569 189 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 FXYD7P58549 80 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 OR8A1Q8NGG7 326 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 NEU1Q99519 415 aa13.5□□□□□ -0.25
CDH11-206ENST00000562998 NDUFB4O95168 129 aa13.49□□□□□ -0.25
CDH11-206ENST00000562998 HIST1H1EP10412 219 aaKnown RBP13.49□□□□□ -0.25
CDH11-206ENST00000562998 MIR17HGQ75NE6 70 aa13.49□□□□□ -0.25
CDH11-206ENST00000562998 RPUSD4Q96CM3 377 aaKnown RBP13.49□□□□□ -0.25
CDH11-206ENST00000562998 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
CDH11-206ENST00000562998 MFFQ9GZY8 342 aa13.49□□□□□ -0.25
CDH11-206ENST00000562998 SACSQ9NZJ4 4579 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 DEFB4AO15263 64 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
CDH11-206ENST00000562998 PYYP10082 97 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 PDE6HQ13956 83 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 C1orf158Q8N1D5 194 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 SCGB1C1Q8TD33 95 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 RFNGQ9Y644 331 aa13.48□□□□□ -0.25
CDH11-206ENST00000562998 PLECQ15149 4684 aaKnown RBP13.48□□□□□ -0.25
CDH11-206ENST00000562998 RNF222A6NCQ9 220 aa13.47□□□□□ -0.25
CDH11-206ENST00000562998 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
CDH11-206ENST00000562998 FUT9Q9Y231 359 aa13.47□□□□□ -0.25
CDH11-206ENST00000562998 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
CDH11-206ENST00000562998 PRAC2D3DTV9 90 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 AMBPP02760 352 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 FFAR4Q5NUL3 377 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 OR2T35Q8NGX2 323 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 TNFSF18Q9UNG2 199 aa13.46□□□□□ -0.25
CDH11-206ENST00000562998 SMIM9A6NGZ8 99 aa13.45□□□□□ -0.26
CDH11-206ENST00000562998 HIST1H1AQ02539 215 aaPredicted RBP13.45□□□□□ -0.26
CDH11-206ENST00000562998 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
CDH11-206ENST00000562998 C11orf45Q8TAV5 145 aa13.45□□□□□ -0.26
CDH11-206ENST00000562998 FXYD5Q96DB9 178 aa13.45□□□□□ -0.26
CDH11-206ENST00000562998 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
CDH11-206ENST00000562998 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
CDH11-206ENST00000562998 RYR2Q92736 4967 aa13.44□□□□□ -0.26
CDH11-206ENST00000562998 BOLA2-SMG1P6H3BVE0 249 aa13.44□□□□□ -0.26
CDH11-206ENST00000562998 M0R2Z0 102 aa13.44□□□□□ -0.26
CDH11-206ENST00000562998 PRB4P10163 310 aaPredicted RBP13.44□□□□□ -0.26
CDH11-206ENST00000562998 ZNF266Q14584 549 aa13.44□□□□□ -0.26
CDH11-206ENST00000562998 CXorf65A6NEN9 183 aa13.43□□□□□ -0.26
CDH11-206ENST00000562998 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
CDH11-206ENST00000562998 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms