RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 ZNF546Q86UE3 836 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 LRRC20Q8TCA0 184 aa11.19□□□□□ -0.62
SF3B3-203ENST00000562874 C5orf51A6NDU8 294 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 CST7O76096 145 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 CAV2P51636 162 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 S100A10P60903 97 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 RHOBP62745 196 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 CNPY1Q3B7I2 92 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
SF3B3-203ENST00000562874 ZNF431Q8TF32 576 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-203ENST00000562874 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 FAM24AA6NFZ4 105 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 M0R2N4 97 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 SLC17A3O00476 420 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 P0DMU3 169 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 FAM231AP0DMU4 169 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 FAM231CP0DMU5 169 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 DAD1P61803 113 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 PSG3Q16557 428 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 OR8A1Q8NGG7 326 aa11.17□□□□□ -0.62
SF3B3-203ENST00000562874 PARD6GQ9BYG4 376 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-203ENST00000562874 UBE2L5PA0A1B0GUS4 154 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 OPCMLQ14982 345 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-203ENST00000562874 POM121L12Q8N7R1 296 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
SF3B3-203ENST00000562874 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 AZU1P20160 251 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 TMEM88Q6PEY1 159 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
SF3B3-203ENST00000562874 CCDC32Q9BV29 185 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 GGACTQ9BVM4 153 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 NDUFA13Q9P0J0 144 aa11.15□□□□□ -0.62
SF3B3-203ENST00000562874 DNAH2Q9P225 4427 aa11.15□□□□□ -0.63
SF3B3-203ENST00000562874 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 HTN1P15515 57 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 CAMLGP49069 296 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 RAB32Q13637 225 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 FCN2Q15485 313 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 C2orf50Q96LR7 162 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-203ENST00000562874 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
SF3B3-203ENST00000562874 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 FAM240BA0A1B0GVZ2 78 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 PRAC2D3DTV9 90 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 CXCL2P19875 107 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 BAXQ07812 192 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 OXA1LQ15070 435 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 BPIFA4PQ86YQ2 179 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 LINC01587Q99440 93 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 UQCC1Q9NVA1 299 aa11.13□□□□□ -0.63
SF3B3-203ENST00000562874 H3BQ15 152 aa11.12□□□□□ -0.63
SF3B3-203ENST00000562874 J3KRW8 73 aa11.12□□□□□ -0.63
SF3B3-203ENST00000562874 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
SF3B3-203ENST00000562874 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-203ENST00000562874 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
SF3B3-203ENST00000562874 PVALBP20472 110 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-203ENST00000562874 CDKN1BP46527 198 aa11.11□□□□□ -0.63
SF3B3-203ENST00000562874 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
SF3B3-203ENST00000562874 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 FGF7P21781 194 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 SULT1A1P50225 295 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 B2MP61769 119 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 VWC2Q2TAL6 325 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 Q6ZRG5 221 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 STX12Q86Y82 276 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 FAM210BQ96KR6 192 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 GPN1Q9HCN4 374 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-203ENST00000562874 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
SF3B3-203ENST00000562874 RTL8CO15255 209 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 SIX6O95475 246 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 TSPOP30536 169 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 IL15RAQ13261 267 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 RAB31Q13636 194 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 OR1L4Q8NGR5 311 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 C16orf74Q96GX8 76 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 SLC39A9Q9NUM3 307 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms