RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 IGFL4Q6B9Z1 124 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 Q6ZNX1 250 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 SLC25A2Q9BXI2 301 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 ZNF331Q9NQX6 463 aaPredicted RBP12.24□□□□□ -0.45
CLK3-207ENST00000562389 FUT9Q9Y231 359 aa12.24□□□□□ -0.45
CLK3-207ENST00000562389 TENM3Q9P273 2699 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 H3BQ15 152 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
CLK3-207ENST00000562389 C4BPBP20851 252 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 NUTF2P61970 127 aaKnown RBP12.23□□□□□ -0.45
CLK3-207ENST00000562389 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 SAT2Q96F10 170 aaPredicted RBP12.23□□□□□ -0.45
CLK3-207ENST00000562389 FAM167A-AS1Q96KT0 104 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
CLK3-207ENST00000562389 F6UB75 175 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 SLC17A3O00476 420 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 ARPC5O15511 151 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 ZNF253O75346 499 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 SNRPCP09234 159 aaKnown RBP12.22□□□□□ -0.45
CLK3-207ENST00000562389 HIST1H1EP10412 219 aaKnown RBP12.22□□□□□ -0.45
CLK3-207ENST00000562389 PSG3Q16557 428 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
CLK3-207ENST00000562389 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 PSMG3Q9BT73 122 aaPredicted RBP12.22□□□□□ -0.45
CLK3-207ENST00000562389 ZNF586Q9NXT0 402 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 CLEC5AQ9NY25 188 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
CLK3-207ENST00000562389 A8MTW9 85 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 H3BTX0 84 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 PYYP10082 97 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 M6PRP20645 277 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 HLA-DMBP28068 263 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 RHOBP62745 196 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 PDE6HQ13956 83 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 MFFQ9GZY8 342 aa12.21□□□□□ -0.45
CLK3-207ENST00000562389 TRBV19A0A075B6N1 114 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 BORCS7-ASMTA0A0B4J1R7 106 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 HMSDA8MTL9 139 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 TAAR5O14804 337 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 ZNF345Q14585 488 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 RPL7L1Q6DKI1 246 aaKnown RBP12.2□□□□□ -0.46
CLK3-207ENST00000562389 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 C1QTNF4Q9BXJ3 329 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 OR51M1Q9H341 326 aa12.2□□□□□ -0.46
CLK3-207ENST00000562389 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
CLK3-207ENST00000562389 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 TAS2R45P59539 299 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 SERF2P84101 59 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 PSG9Q00887 426 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 KHDC3LQ587J8 217 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 OR11H4Q8NGC9 324 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 STAB2Q8WWQ8 2551 aa12.19□□□□□ -0.46
CLK3-207ENST00000562389 NDUFB4O95168 129 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
CLK3-207ENST00000562389 RAB2AP61019 212 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 OR8A1Q8NGG7 326 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
CLK3-207ENST00000562389 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
CLK3-207ENST00000562389 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
CLK3-207ENST00000562389 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 RARRES2Q99969 163 aa12.18□□□□□ -0.46
CLK3-207ENST00000562389 OR7C2O60412 319 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 JTBO76095 146 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 MBP02144 154 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 KCNRGQ8N5I3 272 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 SH3BGRL3Q9H299 93 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 XCL2Q9UBD3 114 aa12.17□□□□□ -0.46
CLK3-207ENST00000562389 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 ZNF705FA8MVS1 300 aaPredicted RBP12.16□□□□□ -0.46
CLK3-207ENST00000562389 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
CLK3-207ENST00000562389 OR10J4P0C629 311 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 ZNF705DP0CH99 300 aaPredicted RBP12.16□□□□□ -0.46
CLK3-207ENST00000562389 ZNF705BP0CI00 300 aaPredicted RBP12.16□□□□□ -0.46
CLK3-207ENST00000562389 HIST1H1AQ02539 215 aaPredicted RBP12.16□□□□□ -0.46
CLK3-207ENST00000562389 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
CLK3-207ENST00000562389 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms