RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ALMS1Q8TCU4 4167 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 TMEM252Q8N6L7 170 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 PFDN5Q99471 154 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 SLC50A1Q9BRV3 221 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 C11orf1Q9H5F2 150 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
CMTM3-204ENST00000562357 INMT-MINDY4F8WBC2 141 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 INSP01308 110 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 CXCL3P19876 107 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 RHOBP62745 196 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 CYCSP99999 105 aaKnown RBP12.83□□□□□ -0.36
CMTM3-204ENST00000562357 HIST1H1AQ02539 215 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-204ENST00000562357 ATP6V1FQ16864 119 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 RRN3P1Q2M238 152 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
CMTM3-204ENST00000562357 DEFB131BA0A096LNP1 70 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 IGSF23A1L1A6 192 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 A8MTW9 85 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 IL15RAQ13261 267 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 PSG3Q16557 428 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 SLC25A31Q9H0C2 315 aa12.82□□□□□ -0.36
CMTM3-204ENST00000562357 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 E5RGE8 158 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 BOLA2-SMG1P6H3BVE0 249 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 MPDU1O75352 247 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 RPL29P47914 159 aaKnown RBP12.81□□□□□ -0.36
CMTM3-204ENST00000562357 B2MP61769 119 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 ZNF767PQ75MW2 155 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 TMEM37Q8WXS4 190 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 NMES1Q9C002 83 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
CMTM3-204ENST00000562357 M0R2Z0 102 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 FGF7P21781 194 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PRR20EP86478 221 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PRR20CP86479 221 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PRR20DP86480 221 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PRR20BP86481 221 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PRR20AP86496 221 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 OPCMLQ14982 345 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 RPUSD4Q96CM3 377 aaKnown RBP12.8□□□□□ -0.36
CMTM3-204ENST00000562357 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 ZNF331Q9NQX6 463 aaPredicted RBP12.8□□□□□ -0.36
CMTM3-204ENST00000562357 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
CMTM3-204ENST00000562357 IGHV4-4A0A075B6R2 117 aa12.79□□□□□ -0.36
CMTM3-204ENST00000562357 MRPS12O15235 138 aaKnown RBP12.79□□□□□ -0.36
CMTM3-204ENST00000562357 SSNA1O43805 119 aa12.79□□□□□ -0.36
CMTM3-204ENST00000562357 SIX6O95475 246 aa12.79□□□□□ -0.36
CMTM3-204ENST00000562357 IFITM3Q01628 133 aa12.79□□□□□ -0.36
CMTM3-204ENST00000562357 GUK1Q16774 197 aa12.79□□□□□ -0.36
CMTM3-204ENST00000562357 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
CMTM3-204ENST00000562357 PET100P0DJ07 73 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 MARVELD1Q9BSK0 173 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 KCNIP2Q9NS61 270 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
CMTM3-204ENST00000562357 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
CMTM3-204ENST00000562357 BAP18Q8IXM2 172 aa12.77□□□□□ -0.37
CMTM3-204ENST00000562357 OR5C1Q8NGR4 320 aa12.77□□□□□ -0.37
CMTM3-204ENST00000562357 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
CMTM3-204ENST00000562357 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
CMTM3-204ENST00000562357 DKK2Q9UBU2 259 aa12.77□□□□□ -0.37
CMTM3-204ENST00000562357 H3BTX0 84 aa12.76□□□□□ -0.37
CMTM3-204ENST00000562357 IGLC2P0DOY2 106 aa12.76□□□□□ -0.37
CMTM3-204ENST00000562357 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
CMTM3-204ENST00000562357 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
CMTM3-204ENST00000562357 NPCDR1Q9BY65 106 aa12.76□□□□□ -0.37
CMTM3-204ENST00000562357 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 CRXO43186 299 aaPredicted RBP12.75□□□□□ -0.37
CMTM3-204ENST00000562357 TSPOP30536 169 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 NHLH2Q02577 135 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 CLINT1Q14677 625 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
CMTM3-204ENST00000562357 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 LINC01587Q99440 93 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 OR5AC2Q9NZP5 309 aa12.75□□□□□ -0.37
CMTM3-204ENST00000562357 HYDINQ4G0P3 5121 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
CMTM3-204ENST00000562357 SLC17A3O00476 420 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 CDKN1BP46527 198 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 DAD1P61803 113 aa12.74□□□□□ -0.37
CMTM3-204ENST00000562357 OXA1LQ15070 435 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms