RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
CLK3-205ENST00000561673 CRXO43186 299 aaPredicted RBP7.33□□□□□ -1.24
CLK3-205ENST00000561673 HBE1P02100 147 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 ZNF846Q147U1 533 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 SPINK13Q1W4C9 94 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 S100A7AQ86SG5 101 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 IGF2BP2-AS1Q96M15 143 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 MGST2Q99735 147 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 NDUFAF3Q9BU61 184 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 CCDC32Q9BV29 185 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 LSM5Q9Y4Y9 91 aaKnown RBP7.33□□□□□ -1.24
CLK3-205ENST00000561673 C5orf51A6NDU8 294 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 L7N2F9 121 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 CST7O76096 145 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
CLK3-205ENST00000561673 H2AFB2P0C5Z0 115 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 PRB4P10163 310 aaPredicted RBP7.32□□□□□ -1.24
CLK3-205ENST00000561673 CXCL3P19876 107 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 BCAP31P51572 246 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 VAMP2P63027 116 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 PSG3Q16557 428 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 PXDC1Q5TGL8 231 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 ZNF546Q86UE3 836 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 C12orf45Q8N5I9 185 aaPredicted RBP7.32□□□□□ -1.24
CLK3-205ENST00000561673 LRRC20Q8TCA0 184 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 TMEM37Q8WXS4 190 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 C2orf50Q96LR7 162 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 TMEM208Q9BTX3 173 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 C11orf1Q9H5F2 150 aa7.32□□□□□ -1.24
CLK3-205ENST00000561673 YTHDF2Q9Y5A9 579 aaKnown RBP7.32□□□□□ -1.24
CLK3-205ENST00000561673 PKD1P98161 4303 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 TRAV12-2A0A075B6T6 113 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 TEX48A0A1B0GUV7 120 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 FAM240BA0A1B0GVZ2 78 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 FAM24AA6NFZ4 105 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 ZNF705GA8MUZ8 300 aaPredicted RBP7.31□□□□□ -1.24
CLK3-205ENST00000561673 CAV2P51636 162 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 HIST1H1AQ02539 215 aaPredicted RBP7.31□□□□□ -1.24
CLK3-205ENST00000561673 OXA1LQ15070 435 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 MORN5Q5VZ52 161 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 BAP18Q8IXM2 172 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 OR8A1Q8NGG7 326 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 DNAJC4Q9NNZ3 241 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
CLK3-205ENST00000561673 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 COX7A2P2O60397 106 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 INSP01308 110 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 P0DMU3 169 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 FAM231AP0DMU4 169 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 FAM231CP0DMU5 169 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 HTN3P15516 51 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 AZU1P20160 251 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 CAMLGP49069 296 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 RHOBP62745 196 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 IL15RAQ13261 267 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 RAB31Q13636 194 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 C10orf113Q5VZT2 155 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 NRARPQ7Z6K4 114 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 BPIFA4PQ86YQ2 179 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 RPUSD4Q96CM3 377 aaKnown RBP7.3□□□□□ -1.24
CLK3-205ENST00000561673 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 ZNF331Q9NQX6 463 aaPredicted RBP7.3□□□□□ -1.24
CLK3-205ENST00000561673 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
CLK3-205ENST00000561673 HERC2O95714 4834 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 TRAV5A0A0B4J249 113 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 H3BTX0 84 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 CXCL2P19875 107 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 PVALBP20472 110 aaPredicted RBP7.29□□□□□ -1.24
CLK3-205ENST00000561673 S100A11P31949 105 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 S100A10P60903 97 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 B2MP61769 119 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 DAD1P61803 113 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 RAB32Q13637 225 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 OPCMLQ14982 345 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 VWC2Q2TAL6 325 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 MIC13Q5XKP0 118 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 MZT2BQ6NZ67 158 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 LCN15Q6UWW0 184 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 Q6ZRG5 221 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 LINC00299Q6ZSB3 139 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 LINC01587Q99440 93 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 LYRM2Q9NU23 88 aaPredicted RBP7.29□□□□□ -1.24
CLK3-205ENST00000561673 UQCC1Q9NVA1 299 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 PPP1R14DQ9NXH3 145 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 WDR83OSQ9Y284 106 aa7.29□□□□□ -1.24
CLK3-205ENST00000561673 IGSF23A1L1A6 192 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 PLAC8L1A1L4L8 177 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 PRAC2D3DTV9 90 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 H3BQ15 152 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 SLC17A3O00476 420 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 IGLC2P0DOY2 106 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 TSPOP30536 169 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 SULT1A1P50225 295 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 ASAH1Q13510 395 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms