RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 DNAJC4Q9NNZ3 241 aa17.17■□□□□ 0.34
CDR2-202ENST00000561630 DUSP14O95147 198 aaKnown RBP17.16■□□□□ 0.34
CDR2-202ENST00000561630 RLN2P04090 185 aa17.16■□□□□ 0.34
CDR2-202ENST00000561630 HLA-DMBP28068 263 aa17.16■□□□□ 0.34
CDR2-202ENST00000561630 RPL29P47914 159 aaKnown RBP17.16■□□□□ 0.34
CDR2-202ENST00000561630 CNN1P51911 297 aaKnown RBP17.16■□□□□ 0.34
CDR2-202ENST00000561630 BPIFA4PQ86YQ2 179 aa17.16■□□□□ 0.34
CDR2-202ENST00000561630 ZNF738Q8NE65 137 aa17.16■□□□□ 0.34
CDR2-202ENST00000561630 SMIM9A6NGZ8 99 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 C11orf94C9JXX5 98 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 E5RGE8 158 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 CXCL2P19875 107 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 H2BFSP57053 126 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 BAXQ07812 192 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 OPCMLQ14982 345 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 MORN5Q5VZ52 161 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 LRRC20Q8TCA0 184 aa17.15■□□□□ 0.34
CDR2-202ENST00000561630 IGHV3OR16-12A0A075B7B8 117 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 H0YIZ8 118 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 PSG3Q16557 428 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 LRRC37A5PQ49AS3 106 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 LCN15Q6UWW0 184 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 OR1L4Q8NGR5 311 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 C2CD4CQ8TF44 421 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 SLC39A9Q9NUM3 307 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 OR5AC2Q9NZP5 309 aa17.14■□□□□ 0.33
CDR2-202ENST00000561630 LY6G6CO95867 125 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 B2MP61769 119 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 NHLH2Q02577 135 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 C1orf158Q8N1D5 194 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 OR11H7Q8NGC8 314 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 PFDN5Q99471 154 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 SLC25A31Q9H0C2 315 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 CELA1Q9UNI1 258 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 GOLT1BQ9Y3E0 138 aa17.13■□□□□ 0.33
CDR2-202ENST00000561630 SSNA1O43805 119 aa17.12■□□□□ 0.33
CDR2-202ENST00000561630 MPDU1O75352 247 aa17.12■□□□□ 0.33
CDR2-202ENST00000561630 FGF7P21781 194 aa17.12■□□□□ 0.33
CDR2-202ENST00000561630 Q6ZTC4 211 aa17.12■□□□□ 0.33
CDR2-202ENST00000561630 IGF2BP2-AS1Q96M15 143 aa17.12■□□□□ 0.33
CDR2-202ENST00000561630 ZNF331Q9NQX6 463 aaPredicted RBP17.12■□□□□ 0.33
CDR2-202ENST00000561630 TMEM189A5PLL7 270 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 AMBPP02760 352 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 SNRPCP09234 159 aaKnown RBP17.11■□□□□ 0.33
CDR2-202ENST00000561630 IGLC2P0DOY2 106 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 OR8A1Q8NGG7 326 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 OR5C1Q8NGR4 320 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 PPP1R1CQ8WVI7 109 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 SLC50A1Q9BRV3 221 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 RFNGQ9Y644 331 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 PXMP4Q9Y6I8 212 aa17.11■□□□□ 0.33
CDR2-202ENST00000561630 TCTAP57738 103 aa17.1■□□□□ 0.33
CDR2-202ENST00000561630 C12orf74Q32Q52 190 aa17.1■□□□□ 0.33
CDR2-202ENST00000561630 RPUSD4Q96CM3 377 aaKnown RBP17.1■□□□□ 0.33
CDR2-202ENST00000561630 NPCDR1Q9BY65 106 aa17.1■□□□□ 0.33
CDR2-202ENST00000561630 EPPK1P58107 5090 aaKnown RBP17.1■□□□□ 0.33
CDR2-202ENST00000561630 TRAV10A0A0B4J240 114 aa17.09■□□□□ 0.33
CDR2-202ENST00000561630 TRAV5A0A0B4J249 113 aa17.09■□□□□ 0.33
CDR2-202ENST00000561630 M0R2Z0 102 aa17.09■□□□□ 0.33
CDR2-202ENST00000561630 HIST1H1AQ02539 215 aaPredicted RBP17.09■□□□□ 0.33
CDR2-202ENST00000561630 SPINK13Q1W4C9 94 aa17.09■□□□□ 0.33
CDR2-202ENST00000561630 H3BQ15 152 aa17.08■□□□□ 0.32
CDR2-202ENST00000561630 SLC17A3O00476 420 aa17.08■□□□□ 0.32
CDR2-202ENST00000561630 CRXO43186 299 aaPredicted RBP17.08■□□□□ 0.32
CDR2-202ENST00000561630 HBE1P02100 147 aa17.08■□□□□ 0.32
CDR2-202ENST00000561630 THAP6Q8TBB0 222 aa17.08■□□□□ 0.32
CDR2-202ENST00000561630 SAT2Q96F10 170 aaPredicted RBP17.08■□□□□ 0.32
CDR2-202ENST00000561630 RNF126Q9BV68 326 aa17.08■□□□□ 0.32
CDR2-202ENST00000561630 IGLL5B9A064 214 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 H3BTX0 84 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 BOLA2-SMG1P6H3BVE0 249 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 SPART-AS1P0CW21 52 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 EMP1P54849 157 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 CLINT1Q14677 625 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 GUK1Q16774 197 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 LGALS9CQ6DKI2 356 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 ZNF767PQ75MW2 155 aa17.07■□□□□ 0.32
CDR2-202ENST00000561630 MPC2O95563 127 aa17.06■□□□□ 0.32
CDR2-202ENST00000561630 INSP01308 110 aa17.06■□□□□ 0.32
CDR2-202ENST00000561630 RHOBP62745 196 aa17.06■□□□□ 0.32
CDR2-202ENST00000561630 TMEM208Q9BTX3 173 aa17.06■□□□□ 0.32
CDR2-202ENST00000561630 VPS13DQ5THJ4 4388 aa17.05■□□□□ 0.32
CDR2-202ENST00000561630 PET100P0DJ07 73 aa17.05■□□□□ 0.32
CDR2-202ENST00000561630 RRN3P1Q2M238 152 aa17.05■□□□□ 0.32
CDR2-202ENST00000561630 APLNQ9ULZ1 77 aa17.05■□□□□ 0.32
CDR2-202ENST00000561630 KMT2AQ03164 3969 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 LOC102723971A0A1B0GUV8 181 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 PRB4P10163 310 aaPredicted RBP17.04■□□□□ 0.32
CDR2-202ENST00000561630 GCSAMLQ5JQS6 135 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 BAP18Q8IXM2 172 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 WDR61Q9GZS3 305 aaKnown RBP17.04■□□□□ 0.32
CDR2-202ENST00000561630 PPP1R14DQ9NXH3 145 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 ZNF586Q9NXT0 402 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 TMEM14CQ9P0S9 112 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 DKK2Q9UBU2 259 aa17.04■□□□□ 0.32
CDR2-202ENST00000561630 DEFB131BA0A096LNP1 70 aa17.03■□□□□ 0.32
CDR2-202ENST00000561630 TEX48A0A1B0GUV7 120 aa17.03■□□□□ 0.32
CDR2-202ENST00000561630 TRAV12-2A0A075B6T6 113 aa17.02■□□□□ 0.32
CDR2-202ENST00000561630 PRAC2D3DTV9 90 aa17.02■□□□□ 0.32
CDR2-202ENST00000561630 ZNF253O75346 499 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms