RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LPCAT4Q643R3 524 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 ZNF880Q6PDB4 577 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 SSX6Q7RTT6 188 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 OR5T1Q8NG75 326 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 OR51A4Q8NGJ6 313 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 OR4A5Q8NH83 315 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 OR1L1Q8NH94 360 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 RXFP4Q8TDU9 374 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 NEK7Q8TDX7 302 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 CANT1Q8WVQ1 401 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TMEM243Q9BU79 118 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 ZNF230Q9UIE0 474 aaPredicted RBP2.21□□□□□ -2.06
HERC1-215ENST00000561436 APLNQ9ULZ1 77 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 DNAH9Q9NYC9 4486 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TANC2Q9HCD6 1990 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 IGHV3-43A0A0B4J1X8 118 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 TRAV10A0A0B4J240 114 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 IGHV7-4-1A0A0J9YVY3 117 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 IZUMO1RA6ND01 250 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 J3QLW9 94 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 ZNF701M0R085 212 aaPredicted RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 ATP8B1O43520 1251 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 DEDDO75618 318 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 UPK1BO75841 260 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 NAPSAO96009 420 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 CDK1P06493 297 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 MIFP14174 115 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 SRMP19623 302 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 TAS2R43P59537 309 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 OR2B8PP59922 312 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 PAFAH1B2P68402 229 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 CDK10Q15131 360 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 MSMO1Q15800 293 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 Q499Y3 187 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 DNAL1Q4LDG9 190 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 MORN3Q6PF18 240 aaPredicted RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 GLIPR1L1Q6UWM5 242 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 C10orf67Q8IYJ2 551 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 LINC00469Q8N7U9 141 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 OR1S1Q8NH92 325 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 GRPEL2Q8TAA5 225 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 ENKURQ8TC29 256 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 MRPL30Q8TCC3 161 aaKnown RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 SLC25A46Q96AG3 418 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 ABHD14BQ96IU4 210 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 TBX5Q99593 518 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 ZNF436Q9C0F3 470 aaPredicted RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 DAZ1Q9NQZ3 744 aaKnown RBP2.2□□□□□ -2.06
HERC1-215ENST00000561436 SLC2A9Q9NRM0 540 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 BABAM2Q9NXR7 383 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 TAS2R1Q9NYW7 299 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 ORC6Q9Y5N6 252 aa2.2□□□□□ -2.06
HERC1-215ENST00000561436 DYNC2H1Q8NCM8 4307 aaKnown RBP2.19□□□□□ -2.06
HERC1-215ENST00000561436 TMEM213A2RRL7 107 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 TMEM189A5PLL7 270 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 LRCOL1A6NCL2 159 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 SMIM9A6NGZ8 99 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 NDUFA4O00483 81 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 MYL12BO14950 172 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 ZNF207O43670 478 aaKnown RBP2.19□□□□□ -2.06
HERC1-215ENST00000561436 CCNKO75909 580 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CDRT1O95170 752 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 MBP02144 154 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CD74P04233 296 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CTXN2P0C2S0 81 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CELP19835 753 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 PSMD7P51665 324 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 FLOT2Q14254 428 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 Q6ZS49 121 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 NEGR1Q7Z3B1 354 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 HS3ST5Q8IZT8 346 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 OR10K1Q8NGX5 313 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 OR10AC1Q8NH08 325 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 SMIM19Q96E16 107 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CENPNQ96H22 339 aaPredicted RBP2.19□□□□□ -2.06
HERC1-215ENST00000561436 PHB2Q99623 299 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 FAM103A1Q9BTL3 118 aaKnown RBP2.19□□□□□ -2.06
HERC1-215ENST00000561436 THTPAQ9BU02 230 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 CHCHD7Q9BUK0 85 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 TTTY10Q9BZA0 68 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 OR51E2Q9H255 320 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 C12orf4Q9NQ89 552 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 PLEKHJ1Q9NW61 149 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 COA4Q9NYJ1 87 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 TAS2R4Q9NYW5 299 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 PRELID3BQ9Y3B1 194 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 SACSQ9NZJ4 4579 aa2.19□□□□□ -2.06
HERC1-215ENST00000561436 IGLV2-18A0A075B6J9 118 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 TRBV6-7A0A0A0MS04 114 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 IGHV3-49A0A0A0MS15 119 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 IGLL5B9A064 214 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 M0R1X1 148 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 GYG2O15488 501 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 CRTAPO75718 401 aaPredicted RBP2.18□□□□□ -2.06
HERC1-215ENST00000561436 SCO1O75880 301 aa2.18□□□□□ -2.06
HERC1-215ENST00000561436 HRASP01112 189 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms