RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	PRM2	P04554	102 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	LINC00869	P0C866	280 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	ID1	P41134	155 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	GALR1	P47211	349 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	NUTF2	P61970	127 aa	Known RBP	5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	DLK1	P80370	383 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	IAH1	Q2TAA2	248 aa	Predicted RBP	5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	PATE2	Q6UY27	113 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	C7orf50	Q9BRJ6	194 aa	Known RBP	5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	SEC22C	Q9BRL7	303 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	SHANK2-AS3	Q9BTD1	123 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	TMEM147	Q9BVK8	224 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	C11orf1	Q9H5F2	150 aa		5.29	□□□□□ -1.56
ZEB1-223	ENST00000561304	DEFB131B	A0A096LNP1	70 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	C7orf66	A4D0T2	115 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	CENPX	A8MT69	81 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	PRSS47	A8MTI9	375 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	ZNF561-AS1	K7EIQ3	104 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304		M0R2Z0	102 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	MRPS12	O15235	138 aa	Known RBP	5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	CRX	O43186	299 aa	Predicted RBP	5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	CFD	P00746	253 aa	Predicted RBP	5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	IFNA21	P01568	189 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	AMBP	P02760	352 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	IL5	P05113	134 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	MEOX2	P50222	304 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	EMP1	P54849	157 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	PLP1	P60201	277 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	PSG9	Q00887	426 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	MORN5	Q5VZ52	161 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	OR11H7	Q8NGC8	314 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	NEU1	Q99519	415 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	MGST2	Q99735	147 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	RPRM	Q9NS64	109 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	NUDT15	Q9NV35	164 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	GSKIP	Q9P0R6	139 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304	HIGD1A	Q9Y241	93 aa		5.28	□□□□□ -1.56
ZEB1-223	ENST00000561304		K7EPK0	472 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	TSC22D2	O75157	780 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	HYPM	O75409	117 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	TCRB	P04435	133 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	SNRPC	P09234	159 aa	Known RBP	5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	OR5G3	P0C626	314 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	CNN1	P51911	297 aa	Known RBP	5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	TCTA	P57738	103 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	FGL1	Q08830	312 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	SPINK13	Q1W4C9	94 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	FAM222A	Q5U5X8	452 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	MZT2B	Q6NZ67	158 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	EBLN2	Q6P2I7	272 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	CFAP161	Q6P656	301 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	BAP18	Q8IXM2	172 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	RNF126	Q9BV68	326 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	ARL6	Q9H0F7	186 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	DKK2	Q9UBU2	259 aa		5.27	□□□□□ -1.57
ZEB1-223	ENST00000561304	TRAV12-2	A0A075B6T6	113 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304		A0A087X0K7	114 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	LOC102723971	A0A1B0GUV8	181 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	SMIM9	A6NGZ8	99 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	FAM25E	A8MYX2	175 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	FNDC10	F2Z333	226 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304		H3BTX0	84 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	SLC17A3	O00476	420 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	AGPAT2	O15120	278 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	CXCL3	P19876	107 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	TAS2R30	P59541	319 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	RAP2B	P61225	183 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	TOR2A	Q5JU69	321 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	SAMD13	Q5VXD3	122 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	SPATA31B1P	Q5VZV4	182 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	OR10P1	Q8NGE3	313 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	ZNF431	Q8TF32	576 aa	Predicted RBP	5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	TMEM37	Q8WXS4	190 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	GPR82	Q96P67	336 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	ARV1	Q9H2C2	271 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	NPVF	Q9HCQ7	196 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	MGAT4C	Q9UBM8	478 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	GOLT1B	Q9Y3E0	138 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	LSM5	Q9Y4Y9	91 aa	Known RBP	5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	RFNG	Q9Y644	331 aa		5.26	□□□□□ -1.57
ZEB1-223	ENST00000561304	IGSF23	A1L1A6	192 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	PLAC8L1	A1L4L8	177 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	FAM24A	A6NFZ4	105 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	CST7	O76096	145 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	SPART-AS1	P0CW21	52 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	RPL7	P18124	248 aa	Known RBP	5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	SELENOT	P62341	195 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	LINC00305	Q7Z4B0	112 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	ZNF738	Q8NE65	137 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	NUDT10	Q8NFP7	164 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	NUDT11	Q96G61	164 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	IGF2BP2-AS1	Q96M15	143 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	NIPSNAP3B	Q9BS92	247 aa		5.25	□□□□□ -1.57
ZEB1-223	ENST00000561304	TRAV5	A0A0B4J249	113 aa		5.24	□□□□□ -1.57
ZEB1-223	ENST00000561304	TMEM189	A5PLL7	270 aa		5.24	□□□□□ -1.57
ZEB1-223	ENST00000561304	C5orf51	A6NDU8	294 aa		5.24	□□□□□ -1.57
ZEB1-223	ENST00000561304	PRAC2	D3DTV9	90 aa		5.24	□□□□□ -1.57
ZEB1-223	ENST00000561304	BOLA2-SMG1P6	H3BVE0	249 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms