RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SPP1P10451 314 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
TPM1-230ENST00000561266 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 MIR17HGQ75NE6 70 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 OR1L4Q8NGR5 311 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 SAT2Q96F10 170 aaPredicted RBP10.09□□□□□ -0.79
TPM1-230ENST00000561266 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 RARRES2Q99969 163 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 ZNF586Q9NXT0 402 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
TPM1-230ENST00000561266 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
TPM1-230ENST00000561266 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 C3orf84H3BNL1 204 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 SMLR1H3BR10 107 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 PYYP10082 97 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 OR4B1Q8NGF8 309 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 SLC25A2Q9BXI2 301 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
TPM1-230ENST00000561266 RPRMQ9NS64 109 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 X6R8D5 127 aa10.08□□□□□ -0.8
TPM1-230ENST00000561266 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 RNF222A6NCQ9 220 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
TPM1-230ENST00000561266 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 S100A7P31151 101 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
TPM1-230ENST00000561266 PSG3Q16557 428 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 BPIFA4PQ86YQ2 179 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 AQP10Q96PS8 301 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 PFDN5Q99471 154 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 HRH4Q9H3N8 390 aa10.07□□□□□ -0.8
TPM1-230ENST00000561266 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
TPM1-230ENST00000561266 NDUFB4O95168 129 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 CNN1P51911 297 aaKnown RBP10.06□□□□□ -0.8
TPM1-230ENST00000561266 Q8NAQ8 132 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 ZNF738Q8NE65 137 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 OR2T35Q8NGX2 323 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
TPM1-230ENST00000561266 PARD6GQ9BYG4 376 aaPredicted RBP10.06□□□□□ -0.8
TPM1-230ENST00000561266 DYNC2H1Q8NCM8 4307 aaKnown RBP10.05□□□□□ -0.8
TPM1-230ENST00000561266 PSG9Q00887 426 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 FFAR4Q5NUL3 377 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 SAMD13Q5VXD3 122 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 EBLN2Q6P2I7 272 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 LCN15Q6UWW0 184 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 MFFQ9GZY8 342 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 TMEM14CQ9P0S9 112 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 TNFSF18Q9UNG2 199 aa10.05□□□□□ -0.8
TPM1-230ENST00000561266 FXYD6-FXYD2A0A087WZ82 144 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 M0R2Z0 102 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
TPM1-230ENST00000561266 IFNA5P01569 189 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 PRM2P04554 102 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 C1orf158Q8N1D5 194 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 LRRC20Q8TCA0 184 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 SCGB1C1Q8TD33 95 aa10.04□□□□□ -0.8
TPM1-230ENST00000561266 RPUSD4Q96CM3 377 aaKnown RBP10.04□□□□□ -0.8
TPM1-230ENST00000561266 TRBV19A0A075B6N1 114 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 M0R3E3 92 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 HIST1H1EP10412 219 aaKnown RBP10.03□□□□□ -0.8
TPM1-230ENST00000561266 CXCL2P19875 107 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 RAB2AP61019 212 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 HIST1H1AQ02539 215 aaPredicted RBP10.03□□□□□ -0.8
TPM1-230ENST00000561266 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 SPINK13Q1W4C9 94 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 ZNF705AQ6ZN79 300 aaPredicted RBP10.03□□□□□ -0.8
TPM1-230ENST00000561266 ASB13Q8WXK3 278 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
TPM1-230ENST00000561266 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 OR10J4P0C629 311 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 NANOS2P60321 138 aaKnown RBP10.02□□□□□ -0.81
TPM1-230ENST00000561266 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 RPL7L1Q6DKI1 246 aaKnown RBP10.02□□□□□ -0.81
TPM1-230ENST00000561266 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 HSD17B11Q8NBQ5 300 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 OR11H4Q8NGC9 324 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 BLNKQ8WV28 456 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 LYSTQ99698 3801 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 C11orf68Q9H3H3 251 aaKnown RBP10.02□□□□□ -0.81
TPM1-230ENST00000561266 RNF24Q9Y225 148 aa10.02□□□□□ -0.81
TPM1-230ENST00000561266 TRAV12-2A0A075B6T6 113 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 ATP6V0CP27449 155 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 NUTF2P61970 127 aaKnown RBP10.01□□□□□ -0.81
TPM1-230ENST00000561266 PMS2P11Q13670 270 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 MRPL32Q9BYC8 188 aaKnown RBP10.01□□□□□ -0.81
TPM1-230ENST00000561266 OR51M1Q9H341 326 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
TPM1-230ENST00000561266 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
TPM1-230ENST00000561266 DUSP14O95147 198 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms