RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 C17orf112F2Z3M2 114 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 B2MP61769 119 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 RPP25LQ8N5L8 163 aaKnown RBP11.53□□□□□ -0.56
LMX1B-204ENST00000561065 OR5C1Q8NGR4 320 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 SLC50A1Q9BRV3 221 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 PPP1R14DQ9NXH3 145 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 HECTD4Q9Y4D8 3996 aa11.52□□□□□ -0.56
LMX1B-204ENST00000561065 MPC2O95563 127 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 IFNA5P01569 189 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PRR20EP86478 221 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PRR20CP86479 221 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PRR20DP86480 221 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PRR20BP86481 221 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PRR20AP86496 221 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 NHLH2Q02577 135 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 FAM78BQ5VT40 261 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PATE2Q6UY27 113 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 GOLT1BQ9Y3E0 138 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 PXMP4Q9Y6I8 212 aa11.52□□□□□ -0.57
LMX1B-204ENST00000561065 A0A0J9YX75 114 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 IGKV3-20P01619 116 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 H2BFSP57053 126 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 SCGB1C1Q8TD33 95 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 MED28Q9H204 178 aa11.51□□□□□ -0.57
LMX1B-204ENST00000561065 OPCMLQ14982 345 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 PSG3Q16557 428 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 LGALS9CQ6DKI2 356 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 Q6ZTC4 211 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 TMEM37Q8WXS4 190 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
LMX1B-204ENST00000561065 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 F6UB75 175 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
LMX1B-204ENST00000561065 FXYD7P58549 80 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 NEU1Q99519 415 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
LMX1B-204ENST00000561065 C11orf94C9JXX5 98 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 RHOBP62745 196 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 CLINT1Q14677 625 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF767PQ75MW2 155 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 ATP5SQ99766 215 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 APLNQ9ULZ1 77 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
LMX1B-204ENST00000561065 FAT2Q9NYQ8 4349 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 H0YIZ8 118 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 CXCL3P19876 107 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 OR10J6PQ8NGY7 276 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
LMX1B-204ENST00000561065 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 SLC35B3Q9H1N7 401 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 HSPB11Q9Y547 144 aa11.47□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF253O75346 499 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 HBE1P02100 147 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 TSPOP30536 169 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 CNN1P51911 297 aaKnown RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 TCTAP57738 103 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 OR8A1Q8NGG7 326 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 WDR61Q9GZS3 305 aaKnown RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
LMX1B-204ENST00000561065 TMEM14CQ9P0S9 112 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 PRELID1Q9Y255 219 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 TIMM9Q9Y5J7 89 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 RFNGQ9Y644 331 aa11.46□□□□□ -0.57
LMX1B-204ENST00000561065 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 TRAV8-2A0A0B4J237 113 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 IGLL5B9A064 214 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 HIST1H1EP10412 219 aaKnown RBP11.45□□□□□ -0.58
LMX1B-204ENST00000561065 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
LMX1B-204ENST00000561065 PDE6HQ13956 83 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
LMX1B-204ENST00000561065 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 MBD2Q9UBB5 411 aa11.45□□□□□ -0.58
LMX1B-204ENST00000561065 TRAV10A0A0B4J240 114 aa11.44□□□□□ -0.58
LMX1B-204ENST00000561065 A8MTW9 85 aa11.44□□□□□ -0.58
LMX1B-204ENST00000561065 MRPS12O15235 138 aaKnown RBP11.44□□□□□ -0.58
LMX1B-204ENST00000561065 INSP01308 110 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms