RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 GNPNAT1Q96EK6 184 aaPredicted RBP7.84□□□□□ -1.15
TPM1-227ENST00000560970 SAT2Q96F10 170 aaPredicted RBP7.84□□□□□ -1.15
TPM1-227ENST00000560970 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 ATP5SQ99766 215 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 RARRES2Q99969 163 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 PARD6GQ9BYG4 376 aaPredicted RBP7.84□□□□□ -1.15
TPM1-227ENST00000560970 CSTL1Q9H114 145 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 WFDC1Q9HC57 220 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 HELTA6NFD8 242 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 AGPAT2O15120 278 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 CA1P00915 261 aaPredicted RBP7.83□□□□□ -1.16
TPM1-227ENST00000560970 SPP1P10451 314 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 SULT1A2P50226 295 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 RAB5CP51148 216 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 CMC4P56277 68 aaPredicted RBP7.83□□□□□ -1.16
TPM1-227ENST00000560970 TCTAP57738 103 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 PLP1P60201 277 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 NANOS2P60321 138 aaKnown RBP7.83□□□□□ -1.16
TPM1-227ENST00000560970 CLINT1Q14677 625 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 PATE2Q6UY27 113 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 OR11H2Q8NH07 326 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 FAM210AQ96ND0 272 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 TMEM147Q9BVK8 224 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 UQCC1Q9NVA1 299 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 SLC45A2Q9UMX9 530 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 WDR83OSQ9Y284 106 aa7.83□□□□□ -1.16
TPM1-227ENST00000560970 ZNF98A6NK75 572 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 SOCS3O14543 225 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 IFNA5P01569 189 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 SELENOTP62341 195 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 ATP6V1FQ16864 119 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 C1orf194Q5T5A4 169 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 C2CD4CQ8TF44 421 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 PCNPQ8WW12 178 aaKnown RBP7.82□□□□□ -1.16
TPM1-227ENST00000560970 UHRF2Q96PU4 802 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 SLC25A39Q9BZJ4 359 aaPredicted RBP7.82□□□□□ -1.16
TPM1-227ENST00000560970 SLC25A22Q9H936 323 aa7.82□□□□□ -1.16
TPM1-227ENST00000560970 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 KNCNA6PVL3 124 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 UMAD1C9J7I0 102 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 FGF7P21781 194 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 DEFB1P60022 68 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 PSMG4Q5JS54 123 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 MIC13Q5XKP0 118 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 EIF4E3Q8N5X7 224 aaKnown RBP7.81□□□□□ -1.16
TPM1-227ENST00000560970 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 HIGD1AQ9Y241 93 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 PKHD1P08F94 4074 aa7.81□□□□□ -1.16
TPM1-227ENST00000560970 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 ZNF705EA8MWA4 302 aaPredicted RBP7.8□□□□□ -1.16
TPM1-227ENST00000560970 HYPMO75409 117 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 OR5G3P0C626 314 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 ATP6V0CP27449 155 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 CAMLGP49069 296 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PRR20EP86478 221 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PRR20CP86479 221 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PRR20DP86480 221 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PRR20BP86481 221 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PRR20AP86496 221 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 OR8I2Q8N0Y5 310 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 HSD17B11Q8NBQ5 300 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 SCGB1C1Q8TD33 95 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 PSMG3Q9BT73 122 aaPredicted RBP7.8□□□□□ -1.16
TPM1-227ENST00000560970 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
TPM1-227ENST00000560970 C11orf94C9JXX5 98 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
TPM1-227ENST00000560970 DEFB4AO15263 64 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 UQCC3Q6UW78 93 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
TPM1-227ENST00000560970 Q8NAQ8 132 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 TMEM37Q8WXS4 190 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 HRH4Q9H3N8 390 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
TPM1-227ENST00000560970 RAB19A4D1S5 217 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 GIG44P09565 113 aaPredicted RBP7.78□□□□□ -1.16
TPM1-227ENST00000560970 GALR1P47211 349 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 RPL29P47914 159 aaKnown RBP7.78□□□□□ -1.16
TPM1-227ENST00000560970 B2MP61769 119 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 TMEM41BQ5BJD5 291 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 ACTL10Q5JWF8 245 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 PXDC1Q5TGL8 231 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 GDF5OSQ5U4N7 250 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 Q6ZRG5 221 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 STHQ8IWL8 128 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 OR2G3Q8NGZ4 309 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 RSG1Q9BU20 258 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
TPM1-227ENST00000560970 WDR61Q9GZS3 305 aaKnown RBP7.78□□□□□ -1.16
TPM1-227ENST00000560970 SEPSECSQ9HD40 501 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms