RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 IGKCP01834 107 aa12.68□□□□□ -0.38
PBX1-219ENST00000560641 GAGE13Q4V321 117 aa12.68□□□□□ -0.38
PBX1-219ENST00000560641 SPRNQ5BIV9 151 aa12.68□□□□□ -0.38
PBX1-219ENST00000560641 KLF17Q5JT82 389 aaPredicted RBP12.68□□□□□ -0.38
PBX1-219ENST00000560641 Q71RC1 249 aaPredicted RBP12.68□□□□□ -0.38
PBX1-219ENST00000560641 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
PBX1-219ENST00000560641 OR11H12B2RN74 326 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 CEACAM4O75871 244 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 MC5RP33032 325 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 RNF7Q9UBF6 113 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 K7ERJ3 54 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 SLC25A17O43808 307 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 IGHG3P01860 377 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 RRN3P1Q2M238 152 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 LYZL1Q6UWQ5 148 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 PCNX2A6NKB5 2137 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 MRPS12O15235 138 aaKnown RBP12.67□□□□□ -0.38
PBX1-219ENST00000560641 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
PBX1-219ENST00000560641 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 NPYP01303 97 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 EXOC3-AS1Q8N2X6 119 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 NXT2Q9NPJ8 142 aaKnown RBP12.66□□□□□ -0.38
PBX1-219ENST00000560641 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
PBX1-219ENST00000560641 CRYGBP07316 175 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 PDE6HQ13956 83 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 DUX4L9Q6RFH8 374 aaPredicted RBP12.66□□□□□ -0.38
PBX1-219ENST00000560641 GEMIN7Q9H840 131 aaKnown RBP12.66□□□□□ -0.38
PBX1-219ENST00000560641 NGBQ9NPG2 151 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
PBX1-219ENST00000560641 H3BRN7 92 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 C10orf55Q5SWW7 151 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 SHANK2-AS3Q9BTD1 123 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 SCNM1Q9BWG6 230 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 CDIP1Q9H305 208 aa12.66□□□□□ -0.38
PBX1-219ENST00000560641 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 H3BMG7 143 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 DPM2O94777 84 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 ETDBQ3ZM63 59 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 ARPC1AQ92747 370 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
PBX1-219ENST00000560641 TRIOO75962 3097 aa12.65□□□□□ -0.39
PBX1-219ENST00000560641 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 TWIST1Q15672 202 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 C8orf86Q6ZUL3 223 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 S100A7AQ86SG5 101 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 VCX2Q9H322 139 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 SLC25A15Q9Y619 301 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
PBX1-219ENST00000560641 GLRXP35754 106 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 FOXI1Q12951 378 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 ZNRD1Q9P1U0 126 aa12.64□□□□□ -0.39
PBX1-219ENST00000560641 CKS2P33552 79 aa12.63□□□□□ -0.39
PBX1-219ENST00000560641 TM4SF20Q53R12 229 aa12.63□□□□□ -0.39
PBX1-219ENST00000560641 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
PBX1-219ENST00000560641 DNAJC13O75165 2243 aa12.63□□□□□ -0.39
PBX1-219ENST00000560641 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
PBX1-219ENST00000560641 H3BTX0 84 aa12.62□□□□□ -0.39
PBX1-219ENST00000560641 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
PBX1-219ENST00000560641 SRSF8Q9BRL6 282 aaKnown RBP12.62□□□□□ -0.39
PBX1-219ENST00000560641 IGLV2-18A0A075B6J9 118 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 A6NJY4 79 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 I3L2K1 104 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 SH2D1AO60880 128 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 CD40P25942 277 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
PBX1-219ENST00000560641 PLGLAQ15195 96 aa12.6□□□□□ -0.39
PBX1-219ENST00000560641 Q5PR19 223 aa12.6□□□□□ -0.39
PBX1-219ENST00000560641 FAM216BQ8N7L0 139 aa12.6□□□□□ -0.39
PBX1-219ENST00000560641 CCL13Q99616 98 aa12.6□□□□□ -0.39
PBX1-219ENST00000560641 RPL27AP46776 148 aaKnown RBP12.6□□□□□ -0.39
PBX1-219ENST00000560641 TMEM178AQ8NBL3 297 aa12.6□□□□□ -0.39
PBX1-219ENST00000560641 LEPP41159 167 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 FAM201AQ5SY85 155 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 APOMO95445 188 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 LYZP61626 148 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 Q8N8P6 123 aa12.59□□□□□ -0.39
PBX1-219ENST00000560641 PRRG2O14669 202 aa12.58□□□□□ -0.39
PBX1-219ENST00000560641 INSL3P51460 131 aa12.58□□□□□ -0.39
PBX1-219ENST00000560641 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms