RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SOCS3O14543 225 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 CCNKO75909 580 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 DUSP14O95147 198 aaKnown RBP7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 RHOBP62745 196 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 BAP18Q8IXM2 172 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 GLYATL2Q8WU03 294 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 UHRF2Q96PU4 802 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 LINC01587Q99440 93 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 RSG1Q9BU20 258 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 Q9H8V8 135 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 CACFD1Q9UGQ2 172 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 KCNIP3Q9Y2W7 256 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 U3KQ87 197 aa7.35□□□□□ -1.23
CDC42BPB-207ENST00000560492 TRAV12-2A0A075B6T6 113 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 C9orf170A2RU37 121 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 B2MP61769 119 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 OR5I1Q13606 314 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 GAMTQ14353 236 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 AARDQ4LEZ3 155 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 IGFL4Q6B9Z1 124 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 C12orf45Q8N5I9 185 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 ZNF738Q8NE65 137 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 OR11H7Q8NGC8 314 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 OR1S1Q8NH92 325 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 RTBDNQ9BSG5 229 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 SLC25A32Q9H2D1 315 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 RBKSQ9H477 322 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 MGAT4CQ9UBM8 478 aa7.34□□□□□ -1.23
CDC42BPB-207ENST00000560492 LRP1BQ9NZR2 4599 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 CBY3A6NI87 242 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 CRYM-AS1A6NIL9 109 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 GOSR2O14653 212 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 SFT2D2O95562 160 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 ORM2P19652 201 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 AZU1P20160 251 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 KRTAP10-2P60368 255 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 RAB11AP62491 216 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 CHAC2Q8WUX2 184 aa7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 GNPNAT1Q96EK6 184 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPB-207ENST00000560492 PIGBOS1A0A0B4J2F0 54 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 A0A0J9YY99 117 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 FAM25EA8MYX2 175 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 BOLA2-SMG1P6H3BVE0 249 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 INAFM2P0DMQ5 153 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 GPX4P36969 197 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 SRPXP78539 464 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 HIST1H1AQ02539 215 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 SMCO1Q147U7 214 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 AMTNQ6UX39 209 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 MITD1Q8WV92 249 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 TMEM147Q9BVK8 224 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 ZNF586Q9NXT0 402 aa7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 TIMM8BQ9Y5J9 83 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPB-207ENST00000560492 IGKV1D-37A0A075B6S9 117 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 C5orf51A6NDU8 294 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 ZNF98A6NK75 572 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 IAPPP10997 89 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 TSPOP30536 169 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 S100A7P31151 101 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 GGNBP1Q5YKI7 109 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 BPIFCQ8NFQ6 507 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 OR1B1Q8NGR6 318 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 OR10J6PQ8NGY7 276 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 LRRC20Q8TCA0 184 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 TRGV9Q99603 122 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 NOP10Q9NPE3 64 aaKnown RBP7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 HSPB7Q9UBY9 170 aa7.31□□□□□ -1.24
CDC42BPB-207ENST00000560492 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 A0A0B4J2A0 478 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 EREGO14944 169 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 CRXO43186 299 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 ADAP1O75689 374 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 PRB4P10163 310 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 CXCL3P19876 107 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 AKR1C1Q04828 323 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 TMEM256Q8N2U0 113 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 GPR82Q96P67 336 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 Q9H3A6 140 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 SHPKQ9UHJ6 478 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 TMEM56-RWDD3S4R434 201 aa7.3□□□□□ -1.24
CDC42BPB-207ENST00000560492 SMCO3A2RU48 225 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 A8MTW9 85 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 CCSO14618 274 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 CFDP00746 253 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 HOXB5P09067 269 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 GIPP09681 153 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 M6PRP20645 277 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 GATA2P23769 480 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 TAS2R60P59551 318 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 RAP2BP61225 183 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms