RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 HRH4Q9H3N8 390 aa10.97□□□□□ -0.65
SNRPA1-210ENST00000560383 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
SNRPA1-210ENST00000560383 DNAH6Q9C0G6 4158 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 UBE2L5PA0A1B0GUS4 154 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 SSNA1O43805 119 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 MPDU1O75352 247 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 CXCL2P19875 107 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 CXCL3P19876 107 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 PSG9Q00887 426 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 NHLH2Q02577 135 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 LRRC37A5PQ49AS3 106 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 FAM78BQ5VT40 261 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 MORN5Q5VZ52 161 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 C10orf113Q5VZT2 155 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 AMTNQ6UX39 209 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 NEU1Q99519 415 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
SNRPA1-210ENST00000560383 ZNF705FA8MVS1 300 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 DEFB4AO15263 64 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 PTTG1O95997 202 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 TCTAP57738 103 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 BAXQ07812 192 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 FGL1Q08830 312 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 OR5C1Q8NGR4 320 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 PFDN5Q99471 154 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
SNRPA1-210ENST00000560383 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 MPC2O95563 127 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 FGF7P21781 194 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 NANOS2P60321 138 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 B2MP61769 119 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 LCN15Q6UWW0 184 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 NPCDR1Q9BY65 106 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 PXMP4Q9Y6I8 212 aa10.94□□□□□ -0.66
SNRPA1-210ENST00000560383 SMIM9A6NGZ8 99 aa10.93□□□□□ -0.66
SNRPA1-210ENST00000560383 PET100P0DJ07 73 aa10.93□□□□□ -0.66
SNRPA1-210ENST00000560383 FXYD7P58549 80 aa10.93□□□□□ -0.66
SNRPA1-210ENST00000560383 PSG3Q16557 428 aa10.93□□□□□ -0.66
SNRPA1-210ENST00000560383 SLC50A1Q9BRV3 221 aa10.93□□□□□ -0.66
SNRPA1-210ENST00000560383 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 OR11H7Q8NGC8 314 aa10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 C2CD4CQ8TF44 421 aa10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 ALG5Q9Y673 324 aa10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 DNAH10Q8IVF4 4471 aa10.92□□□□□ -0.66
SNRPA1-210ENST00000560383 TRAV5A0A0B4J249 113 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 H3BQ15 152 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 AMBPP02760 352 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 HLA-DMBP28068 263 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 GUK1Q16774 197 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 C1orf158Q8N1D5 194 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 OR8A1Q8NGG7 326 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 THAP6Q8TBB0 222 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 LRRC20Q8TCA0 184 aa10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 WDR61Q9GZS3 305 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-210ENST00000560383 SLC17A3O00476 420 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 ZNF253O75346 499 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 CLINT1Q14677 625 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 RPUSD4Q96CM3 377 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 HSPB11Q9Y547 144 aa10.9□□□□□ -0.66
SNRPA1-210ENST00000560383 TMEM189A5PLL7 270 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 CRXO43186 299 aaPredicted RBP10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 ATP5SQ99766 215 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 KCNIP2Q9NS61 270 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 MBD2Q9UBB5 411 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 GOLT1BQ9Y3E0 138 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 RFNGQ9Y644 331 aa10.89□□□□□ -0.67
SNRPA1-210ENST00000560383 SNRPCP09234 159 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-210ENST00000560383 RPL12P30050 165 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-210ENST00000560383 GCSAMLQ5JQS6 135 aa10.88□□□□□ -0.67
SNRPA1-210ENST00000560383 ZNF586Q9NXT0 402 aa10.88□□□□□ -0.67
SNRPA1-210ENST00000560383 CELA1Q9UNI1 258 aa10.88□□□□□ -0.67
SNRPA1-210ENST00000560383 TRBV19A0A075B6N1 114 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 H3BTX0 84 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 BOLA2-SMG1P6H3BVE0 249 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 M0R2Z0 102 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 HIST1H1AQ02539 215 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 SPINK13Q1W4C9 94 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 Q6ZTC4 211 aa10.87□□□□□ -0.67
SNRPA1-210ENST00000560383 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms