RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 SOCS3O14543 225 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 CD7P09564 240 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 RAB5CP51148 216 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 FGF8P55075 233 aaPredicted RBP13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 DPPA3Q6W0C5 159 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 PQLC2Q6ZP29 291 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 PRR25Q96S07 402 aa13.95□□□□□ -0.18
USP3-AS1-203ENST00000559737 TRAV2A0A0B4J234 112 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 MAP1LC3B2A6NCE7 125 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 SLC17A3O00476 420 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 UBE2L3P68036 154 aaKnown RBP13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 KPRPQ5T749 579 aaPredicted RBP13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 IGFL4Q6B9Z1 124 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 TEX261Q6UWH6 196 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 BLNKQ8WV28 456 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 MAP1LC3BQ9GZQ8 125 aa13.94□□□□□ -0.18
USP3-AS1-203ENST00000559737 CXorf1O96002 111 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 NBEAP1P0C6P0 100 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 GCHFRP30047 84 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 MEOX2P50222 304 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 MBD3L1Q8WWY6 194 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 SAT2Q96F10 170 aaPredicted RBP13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 TMPRSS5Q9H3S3 457 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 UBQLN2Q9UHD9 624 aa13.93□□□□□ -0.18
USP3-AS1-203ENST00000559737 TRBV19A0A075B6N1 114 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 TRAV8-2A0A0B4J237 113 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 A0A1B0GV50 99 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 NDUFB4O95168 129 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 H2AFB1P0C5Y9 115 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 LRRC20Q8TCA0 184 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 SFT2D1Q8WV19 159 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 C16orf92Q96LL3 132 aa13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 ZMAT5Q9UDW3 170 aaKnown RBP13.92□□□□□ -0.18
USP3-AS1-203ENST00000559737 ZNF705EA8MWA4 302 aaPredicted RBP13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 PRB2P02812 416 aaPredicted RBP13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 HLA-DMBP28068 263 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 CD81P60033 236 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 GUK1Q16774 197 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 ODF3L2Q3SX64 289 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 IQCF2Q8IXL9 164 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 ZNF680Q8NEM1 530 aa13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 ZNF331Q9NQX6 463 aaPredicted RBP13.91□□□□□ -0.18
USP3-AS1-203ENST00000559737 ISLRO14498 428 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 C20orf173Q96LM9 149 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 MAP6D1Q9H9H5 199 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 C19orf73Q9NVV2 129 aa13.9□□□□□ -0.18
USP3-AS1-203ENST00000559737 ID1P41134 155 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 PSMB3P49720 205 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 DEFB131AP59861 70 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 PSMG4Q5JS54 123 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 GTSCR1Q86UQ5 136 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 Q8N1Y9 231 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 SUN5Q8TC36 379 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 LINC00052Q96N35 136 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 SLC50A1Q9BRV3 221 aa13.9□□□□□ -0.19
USP3-AS1-203ENST00000559737 ZNF253O75346 499 aa13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 PRB4P10163 310 aaPredicted RBP13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 SNRPD3P62318 126 aaKnown RBP13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 PDE6HQ13956 83 aa13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 ZNF124Q15973 351 aa13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 SAMD13Q5VXD3 122 aa13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 TMEM167BQ9NRX6 74 aa13.89□□□□□ -0.19
USP3-AS1-203ENST00000559737 IFNA7P01567 189 aa13.88□□□□□ -0.19
USP3-AS1-203ENST00000559737 DEFB1P60022 68 aa13.88□□□□□ -0.19
USP3-AS1-203ENST00000559737 RANP62826 216 aaKnown RBP13.88□□□□□ -0.19
USP3-AS1-203ENST00000559737 APRG1Q8IVJ8 170 aa13.88□□□□□ -0.19
USP3-AS1-203ENST00000559737 EXOC3-AS1Q8N2X6 119 aa13.88□□□□□ -0.19
USP3-AS1-203ENST00000559737 OR11H12B2RN74 326 aa13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 CCL20P78556 96 aa13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 IFITM2Q01629 132 aa13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 PCNPQ8WW12 178 aaKnown RBP13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 AURKAIP1Q9NWT8 199 aaPredicted RBP13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 AGRNO00468 2067 aa13.87□□□□□ -0.19
USP3-AS1-203ENST00000559737 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 BLOC1S1P78537 153 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 PSG9Q00887 426 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 ICAM4Q14773 271 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 PSG3Q16557 428 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 DEFB125Q8N687 156 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 Q9H3A6 140 aa13.86□□□□□ -0.19
USP3-AS1-203ENST00000559737 ZNF705FA8MVS1 300 aaPredicted RBP13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 M0R3E3 92 aa13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 HBE1P02100 147 aa13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 UBE2G2P60604 165 aa13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
USP3-AS1-203ENST00000559737 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
USP3-AS1-203ENST00000559737 ZNF738Q8NE65 137 aa13.84□□□□□ -0.19
USP3-AS1-203ENST00000559737 AAMDCQ9H7C9 122 aa13.84□□□□□ -0.19
USP3-AS1-203ENST00000559737 YTHDF2Q9Y5A9 579 aaKnown RBP13.84□□□□□ -0.19
USP3-AS1-203ENST00000559737 PGPA6NDG6 321 aa13.83□□□□□ -0.2
USP3-AS1-203ENST00000559737 KNCNA6PVL3 124 aa13.83□□□□□ -0.2
USP3-AS1-203ENST00000559737 F6UB75 175 aa13.83□□□□□ -0.2
USP3-AS1-203ENST00000559737 PRAC2D3DTV9 90 aa13.82□□□□□ -0.2
USP3-AS1-203ENST00000559737 TEX46H3BTG2 121 aa13.82□□□□□ -0.2
USP3-AS1-203ENST00000559737 K7EIL1 84 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms