RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 Q6ZQY7 126 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 GOLT1AQ6ZVE7 132 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 CHCHD1Q96BP2 118 aaKnown RBP-0.19□□□□□ -2.44
CASC4-210ENST00000559550 PPP1R14BQ96C90 147 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 ERBINQ96RT1 1412 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 COL24A1Q17RW2 1714 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 TRAV27A0A087WT01 109 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 C9orf170A2RU37 121 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 TMEM114B3SHH9 223 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 CRHP06850 196 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 CDKN2CP42773 168 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 FXYD6P3P58550 94 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 CCL7P80098 99 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 OR4K15Q8NH41 348 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 HYLS1Q96M11 299 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 CCL19Q99731 98 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 LIMD2Q9BT23 127 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 NMNAT1Q9HAN9 279 aaPredicted RBP-0.2□□□□□ -2.44
CASC4-210ENST00000559550 HSPB8Q9UJY1 196 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 SLC22A13Q9Y226 551 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 RNF11Q9Y3C5 154 aa-0.2□□□□□ -2.44
CASC4-210ENST00000559550 FAM32AQ9Y421 112 aaKnown RBP-0.2□□□□□ -2.44
CASC4-210ENST00000559550 CEP164Q9UPV0 1460 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 HMGB3O15347 200 aaKnown RBP-0.21□□□□□ -2.44
CASC4-210ENST00000559550 IFNA7P01567 189 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 QRFPP83859 136 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 LIN52Q52LA3 116 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 S100A7AQ86SG5 101 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 OR10X1Q8NGY0 326 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 BTF3L4Q96K17 158 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 TCEAL2Q9H3H9 227 aaPredicted RBP-0.21□□□□□ -2.44
CASC4-210ENST00000559550 PARVGQ9HBI0 331 aa-0.21□□□□□ -2.44
CASC4-210ENST00000559550 MYO5AQ9Y4I1 1855 aaKnown RBP-0.21□□□□□ -2.44
CASC4-210ENST00000559550 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
CASC4-210ENST00000559550 TAF1AQ15573 450 aaPredicted RBP-0.22□□□□□ -2.44
CASC4-210ENST00000559550 RGS21Q2M5E4 152 aa-0.22□□□□□ -2.44
CASC4-210ENST00000559550 LRRC18Q8N456 261 aa-0.22□□□□□ -2.44
CASC4-210ENST00000559550 ZHX1-C8orf76Q96EF9 292 aa-0.22□□□□□ -2.44
CASC4-210ENST00000559550 POPDC3Q9HBV1 291 aa-0.22□□□□□ -2.44
CASC4-210ENST00000559550 ENY2Q9NPA8 101 aa-0.22□□□□□ -2.44
CASC4-210ENST00000559550 LOC285556D6RIA3 1793 aa-0.22□□□□□ -2.45
CASC4-210ENST00000559550 ABCA12Q86UK0 2595 aa-0.22□□□□□ -2.45
CASC4-210ENST00000559550 NUP98P52948 1817 aa-0.22□□□□□ -2.45
CASC4-210ENST00000559550 MIA2Q96PC5 1412 aa-0.22□□□□□ -2.45
CASC4-210ENST00000559550 DOCK4Q8N1I0 1966 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 OTOGQ6ZRI0 2925 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 K7ERJ3 54 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 CXCL1P09341 107 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 NFYBP25208 207 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 INSL3P51460 131 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 ERVS71-1P61550 626 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 PRR15Q8IV56 129 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 PPTC7Q8NI37 304 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 ASB4Q9Y574 426 aa-0.23□□□□□ -2.45
CASC4-210ENST00000559550 hDV103S1A0JD37 113 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 C1QBP02746 253 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 ARPP19P56211 112 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 RPL37AP61513 92 aaKnown RBP-0.24□□□□□ -2.45
CASC4-210ENST00000559550 VBP1P61758 197 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 KLRD1Q13241 179 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 FOXI2Q6ZQN5 318 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 RMND5BQ96G75 393 aaPredicted RBP-0.24□□□□□ -2.45
CASC4-210ENST00000559550 ZNF714Q96N38 554 aa-0.24□□□□□ -2.45
CASC4-210ENST00000559550 CACYBPQ9HB71 228 aaKnown RBP-0.24□□□□□ -2.45
CASC4-210ENST00000559550 TTC28Q96AY4 2481 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 BANF1O75531 89 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 LY6G6CO95867 125 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 CST2P09228 141 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 TMBIM6P55061 237 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 HSPE1P61604 102 aaKnown RBP-0.25□□□□□ -2.45
CASC4-210ENST00000559550 MIR22HGQ0VDD5 57 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 SPA17Q15506 151 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 PXT1Q8NFP0 134 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 C9orf16Q9BUW7 83 aa-0.25□□□□□ -2.45
CASC4-210ENST00000559550 BOKQ9UMX3 212 aaPredicted RBP-0.25□□□□□ -2.45
CASC4-210ENST00000559550 PCF11O94913 1555 aaKnown RBP-0.25□□□□□ -2.45
CASC4-210ENST00000559550 CELSR1Q9NYQ6 3014 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 MYLKQ15746 1914 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 IGHV3-33P01772 117 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 NCALDP61601 193 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 ASB16-AS1Q495Z4 193 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 HIVEP3Q5T1R4 2406 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 ANK2Q01484 3957 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 CACNA1HO95180 2353 aa-0.26□□□□□ -2.45
CASC4-210ENST00000559550 UBR5O95071 2799 aaPredicted RBP-0.27□□□□□ -2.45
CASC4-210ENST00000559550 ADGRL3Q9HAR2 1447 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 A0A096LPI6 279 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 DUXBA0A1W2PPF3 345 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 ODAMA1E959 279 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 RER1O15258 196 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 SERPINA1P01009 418 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 IDO1P14902 403 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 PDE6GP18545 87 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 MSMO1Q15800 293 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 DGCR14Q96DF8 476 aaKnown RBP-0.27□□□□□ -2.45
CASC4-210ENST00000559550 POLQO75417 2590 aa-0.27□□□□□ -2.45
CASC4-210ENST00000559550 A0A0J9YY99 117 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 GPR31O00270 319 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 CTXN2P0C2S0 81 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 CASC2Q6XLA1 102 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms