RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 RNF182Q8N6D2 247 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 SAT2Q96F10 170 aaPredicted RBP14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 SLC25A2Q9BXI2 301 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 HRH4Q9H3N8 390 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 CYTL1Q9NRR1 136 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 ZNF586Q9NXT0 402 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 TMEM14CQ9P0S9 112 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 FUT9Q9Y231 359 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 F6UB75 175 aa14.89□□□□□ -0.03
TSPAN3-207ENST00000559494 LRRC20Q8TCA0 184 aa14.89□□□□□ -0.03
TSPAN3-207ENST00000559494 MRPL32Q9BYC8 188 aaKnown RBP14.89□□□□□ -0.03
TSPAN3-207ENST00000559494 SAV1Q9H4B6 383 aaPredicted RBP14.89□□□□□ -0.03
TSPAN3-207ENST00000559494 RPRMQ9NS64 109 aa14.89□□□□□ -0.03
TSPAN3-207ENST00000559494 BORCS7-ASMTA0A0B4J1R7 106 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 SLC17A3O00476 420 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 TAAR5O14804 337 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 C1QBP02746 253 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 PYYP10082 97 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 HIST1H1EP10412 219 aaKnown RBP14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 HLA-DRB4P13762 266 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 ACOT6Q3I5F7 207 aaPredicted RBP14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 LCN15Q6UWW0 184 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 FOXI2Q6ZQN5 318 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 Q6ZWC4 215 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 KCNRGQ8N5I3 272 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 OVOL2Q9BRP0 275 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 PSMG3Q9BT73 122 aaPredicted RBP14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 ZNF331Q9NQX6 463 aaPredicted RBP14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 HLA-DRB4X5D2U9 266 aa14.88□□□□□ -0.03
TSPAN3-207ENST00000559494 GIG44P09565 113 aaPredicted RBP14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 M6PRP20645 277 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 RAB2AP61019 212 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 ZNF345Q14585 488 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 PSG3Q16557 428 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 OR2G3Q8NGZ4 309 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 SH3BGRL3Q9H299 93 aa14.87□□□□□ -0.03
TSPAN3-207ENST00000559494 A0A0J9YX75 114 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 EIF3GO75821 320 aaKnown RBP eCLIP14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 RHOBP62745 196 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 GUK1Q16774 197 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 ZNF503Q96F45 646 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 SLC50A1Q9BRV3 221 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 OR51M1Q9H341 326 aa14.86□□□□□ -0.03
TSPAN3-207ENST00000559494 TRBV19A0A075B6N1 114 aa14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 JTBO76095 146 aa14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 SERF2P84101 59 aa14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 EBLN2Q6P2I7 272 aa14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 MORN3Q6PF18 240 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 RNF183Q96D59 192 aa14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 GNPNAT1Q96EK6 184 aaPredicted RBP14.85□□□□□ -0.03
TSPAN3-207ENST00000559494 A0A0D9SG52 128 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 SPRY2O43597 315 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 NDUFB4O95168 129 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 CA1P00915 261 aaPredicted RBP14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 IGKV3-20P01619 116 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 PRB4P10163 310 aaPredicted RBP14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 SPP1P10451 314 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 LGALSLQ3ZCW2 172 aaPredicted RBP14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 ZNF738Q8NE65 137 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 OR10G4Q8NGN3 311 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 OR10G9Q8NGN4 311 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 OR10G7Q8NGN6 311 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 FXYD5Q96DB9 178 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 ARPC5LQ9BPX5 153 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 PAXXQ9BUH6 204 aa14.84□□□□□ -0.03
TSPAN3-207ENST00000559494 ZNF705FA8MVS1 300 aaPredicted RBP14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 ZNF253O75346 499 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 NBEAP1P0C6P0 100 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 ZNF705DP0CH99 300 aaPredicted RBP14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 ZNF705BP0CI00 300 aaPredicted RBP14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 C4BPBP20851 252 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 FAM122CQ6P4D5 195 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 TMUB2Q71RG4 321 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 RPP25LQ8N5L8 163 aaKnown RBP14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 OR4B1Q8NGF8 309 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 BLNKQ8WV28 456 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 RNF141Q8WVD5 230 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 HYLS1Q96M11 299 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 CLUHP3Q96NS8 147 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 TP53TG1Q9Y2A0 90 aa14.83□□□□□ -0.04
TSPAN3-207ENST00000559494 A0A1W2PPV4 95 aa14.82□□□□□ -0.04
TSPAN3-207ENST00000559494 OR10J4P0C629 311 aa14.82□□□□□ -0.04
TSPAN3-207ENST00000559494 RPUSD4Q96CM3 377 aaKnown RBP14.82□□□□□ -0.04
TSPAN3-207ENST00000559494 A8MTW9 85 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 BCL2L11O43521 198 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 OR7C2O60412 319 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 TAS2R45P59539 299 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 PDE6HQ13956 83 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 ZFP69Q49AA0 526 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 CLEC5AQ9NY25 188 aa14.81□□□□□ -0.04
TSPAN3-207ENST00000559494 KANTRA0A1W2PQU2 76 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 PRAC2D3DTV9 90 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 MBP02144 154 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 CNN1P51911 297 aaKnown RBP14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 FXYD7P58549 80 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 KHDC3LQ587J8 217 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 OR8A1Q8NGG7 326 aa14.8□□□□□ -0.04
TSPAN3-207ENST00000559494 HMGB3O15347 200 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms