RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PET100P0DJ07 73 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 CXCL3P19876 107 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 NHLH2Q02577 135 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 CLINT1Q14677 625 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 OPCMLQ14982 345 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 PSG3Q16557 428 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 SPINK13Q1W4C9 94 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 VWC2Q2TAL6 325 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 MORN5Q5VZ52 161 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 LCN15Q6UWW0 184 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 Q6ZTC4 211 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 ZNF767PQ75MW2 155 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 ZNF709Q8N972 641 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 OR5C1Q8NGR4 320 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 THAP6Q8TBB0 222 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 C2CD4CQ8TF44 421 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 TMEM37Q8WXS4 190 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 C17orf77Q96MU5 243 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 PFDN5Q99471 154 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 SLC50A1Q9BRV3 221 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 HRH4Q9H3N8 390 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 DNAJC4Q9NNZ3 241 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 SLC39A9Q9NUM3 307 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 CELA1Q9UNI1 258 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 PXMP4Q9Y6I8 212 aa5.92□□□□□ -1.46
SNX1-207ENST00000559401 TRAV10A0A0B4J240 114 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 TRAV5A0A0B4J249 113 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 ZNF705FA8MVS1 300 aaPredicted RBP5.91□□□□□ -1.46
SNX1-207ENST00000559401 IGLL5B9A064 214 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 C11orf94C9JXX5 98 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 M0R2Z0 102 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 MPDU1O75352 247 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 INSP01308 110 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 HBE1P02100 147 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 AMBPP02760 352 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 CXCL2P19875 107 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 RPL29P47914 159 aaKnown RBP5.91□□□□□ -1.46
SNX1-207ENST00000559401 H2BFSP57053 126 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PRR20EP86478 221 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PRR20CP86479 221 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PRR20DP86480 221 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PRR20BP86481 221 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PRR20AP86496 221 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 ZNF705AQ6ZN79 300 aaPredicted RBP5.91□□□□□ -1.46
SNX1-207ENST00000559401 OR11H7Q8NGC8 314 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 PPP1R1CQ8WVI7 109 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 RPUSD4Q96CM3 377 aaKnown RBP5.91□□□□□ -1.46
SNX1-207ENST00000559401 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 RFNGQ9Y644 331 aa5.91□□□□□ -1.46
SNX1-207ENST00000559401 TRAV12-2A0A075B6T6 113 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 LOC102723971A0A1B0GUV8 181 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 TMEM189A5PLL7 270 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 SMIM9A6NGZ8 99 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 H0YIZ8 118 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 BOLA2-SMG1P6H3BVE0 249 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 SLC17A3O00476 420 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 MRPS12O15235 138 aaKnown RBP5.9□□□□□ -1.46
SNX1-207ENST00000559401 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 RRN3P1Q2M238 152 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 AMTNQ6UX39 209 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 BAP18Q8IXM2 172 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 C1orf158Q8N1D5 194 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 OR8A1Q8NGG7 326 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 OR10J6PQ8NGY7 276 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 IGF2BP2-AS1Q96M15 143 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 NEU1Q99519 415 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 ZNF331Q9NQX6 463 aaPredicted RBP5.9□□□□□ -1.46
SNX1-207ENST00000559401 KCNIP2Q9NS61 270 aa5.9□□□□□ -1.46
SNX1-207ENST00000559401 DEFB131BA0A096LNP1 70 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 A8MTW9 85 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 C17orf112F2Z3M2 114 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 H3BQ15 152 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 MPC2O95563 127 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 PTTG1O95997 202 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 IGLC2P0DOY2 106 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 GUK1Q16774 197 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 C12orf74Q32Q52 190 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 ATP5SQ99766 215 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 SMIM3Q9BZL3 60 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 MBD2Q9UBB5 411 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 YTHDF2Q9Y5A9 579 aaKnown RBP5.89□□□□□ -1.47
SNX1-207ENST00000559401 ALG5Q9Y673 324 aa5.89□□□□□ -1.47
SNX1-207ENST00000559401 DYNC2H1Q8NCM8 4307 aaKnown RBP5.89□□□□□ -1.47
SNX1-207ENST00000559401 RYR2Q92736 4967 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 IGHV4-4A0A075B6R2 117 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 TEX48A0A1B0GUV7 120 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 ZNF705GA8MUZ8 300 aaPredicted RBP5.88□□□□□ -1.47
SNX1-207ENST00000559401 J3KRW8 73 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 IFNA5P01569 189 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 PYYP10082 97 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 HTN1P15515 57 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 HTN3P15516 51 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 RPL12P30050 165 aaKnown RBP5.88□□□□□ -1.47
SNX1-207ENST00000559401 SCGB1C1Q8TD33 95 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 CHAC2Q8WUX2 184 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 BLNKQ8WV28 456 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 WDR61Q9GZS3 305 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 313.5 ms