RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 CFC1P0CG37 223 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 OR13C7P0DN81 318 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 FOLR2P14207 255 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 S100PP25815 95 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 S100A7P31151 101 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 GPX4P36969 197 aaPredicted RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 FHITP49789 147 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 B2MP61769 119 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 RPL19P84098 196 aaKnown RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 HES1Q14469 280 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 HAGHQ16775 308 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 C2orf83Q53S99 150 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 C9orf152Q5JTZ5 239 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 LCN15Q6UWW0 184 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 MMD2Q8IY49 270 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 Q8N9W7 124 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 ZNF383Q8NA42 475 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 OR4X2Q8NGF9 303 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 OR1L6Q8NGR2 347 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 RNASEH2CQ8TDP1 164 aaKnown RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 RXFP4Q8TDU9 374 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 NOL4LQ96MY1 436 aaPredicted RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 PFDN5Q99471 154 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 SRSF8Q9BRL6 282 aaKnown RBP3.83□□□□□ -1.8
CASC4-207ENST00000559037 HINT2Q9BX68 163 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 BIN3Q9NQY0 253 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 TMEM167BQ9NRX6 74 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 NAT8Q9UHE5 227 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 PUS1Q9Y606 427 aaKnown RBP eCLIP3.83□□□□□ -1.8
CASC4-207ENST00000559037 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
CASC4-207ENST00000559037 A0A1B0GV50 99 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 PGPEP1LA6NFU8 196 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 NCBP2LA6PVI3 153 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 ZNF727A8MUV8 499 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 H3BQ15 152 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 PPP1R2P9O14990 202 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CLN5O75503 358 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 OR2C1O95371 312 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 MOSP00540 346 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 AMBPP02760 352 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 PRB2P02812 416 aaPredicted RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 SRP19P09132 144 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 SAA1P0DJI8 122 aaPredicted RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 CT45A6P0DMU7 189 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CT45A5P0DMU8 189 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CT45A7P0DMV0 189 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 IGLL1P15814 213 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 RPL29P47914 159 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 NPBWR1P48145 328 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 REG1BP48304 166 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CEBPGP53567 150 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 SELENOTP62341 195 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 KIAA0141Q14154 515 aaPredicted RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 ZNF876PQ49A33 203 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 AKIRIN2Q53H80 203 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 TMEM144Q7Z5S9 345 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CBLN2Q8IUK8 224 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 STPG4Q8N801 248 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 CYB561D1Q8N8Q1 229 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 OR1L4Q8NGR5 311 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 TMEM167AQ8TBQ9 72 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 RPUSD4Q96CM3 377 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 OR5B12Q96R08 314 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 NABP2Q9BQ15 211 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 TCEAL7Q9BRU2 100 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 MRPL32Q9BYC8 188 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 MRPL20Q9BYC9 149 aaKnown RBP3.82□□□□□ -1.8
CASC4-207ENST00000559037 SLC25A22Q9H936 323 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 LINC00527Q9UJ94 153 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 RNF24Q9Y225 148 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 PXMP4Q9Y6I8 212 aa3.82□□□□□ -1.8
CASC4-207ENST00000559037 FAM74A7A6NL05 159 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 NUPL2O15504 423 aaKnown RBP3.81□□□□□ -1.8
CASC4-207ENST00000559037 IGHG4P01861 327 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 IGF1P05019 195 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 MYCNOSP40205 109 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 CDX1P47902 265 aaPredicted RBP3.81□□□□□ -1.8
CASC4-207ENST00000559037 EGFEM1PQ0D2K5 195 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 PLGLAQ15195 96 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 SPINK9Q5DT21 86 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 TEX38Q6PEX7 206 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 KCNIP4Q6PIL6 250 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 ATRAIDQ6UW56 229 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 CYP2G1PQ6ZSU1 146 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 VKORC1L1Q8N0U8 176 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 RPP25LQ8N5L8 163 aaKnown RBP3.81□□□□□ -1.8
CASC4-207ENST00000559037 STXBP6Q8NFX7 210 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 NPBQ8NG41 125 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 SMIM7Q9BQ49 75 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 GGTLC1Q9BX51 225 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 NDUFA4L2Q9NRX3 87 aa3.81□□□□□ -1.8
CASC4-207ENST00000559037 TECRQ9NZ01 308 aaKnown RBP3.81□□□□□ -1.8
CASC4-207ENST00000559037 DNAH3Q8TD57 4116 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms