RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF546Q86UE3 836 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 STX12Q86Y82 276 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 SAV1Q9H4B6 383 aaPredicted RBP8.71□□□□□ -1.02
TPM1-216ENST00000558910 RPRMQ9NS64 109 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 OR5AC2Q9NZP5 309 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 X6R8D5 127 aa8.71□□□□□ -1.02
TPM1-216ENST00000558910 hCG_2014768A0A024R1R8 64 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 TRAV8-2A0A0B4J237 113 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 S100A7P31151 101 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 SULT1A1P50225 295 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 NHLH2Q02577 135 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 CLINT1Q14677 625 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 CEMP1Q6PRD7 247 aaPredicted RBP8.7□□□□□ -1.02
TPM1-216ENST00000558910 TMEM252Q8N6L7 170 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 Q8NAQ8 132 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 THAP6Q8TBB0 222 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 MFFQ9GZY8 342 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 LYRM2Q9NU23 88 aaPredicted RBP8.7□□□□□ -1.02
TPM1-216ENST00000558910 SLC45A2Q9UMX9 530 aa8.7□□□□□ -1.02
TPM1-216ENST00000558910 NUPR2A6NF83 97 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 RLN2P04090 185 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 RPL7P18124 248 aaKnown RBP8.69□□□□□ -1.02
TPM1-216ENST00000558910 MEOX2P50222 304 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 RHOBP62745 196 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 PSG9Q00887 426 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 HIST1H1AQ02539 215 aaPredicted RBP8.69□□□□□ -1.02
TPM1-216ENST00000558910 RAB31Q13636 194 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 C10orf113Q5VZT2 155 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 GGACTQ9BVM4 153 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 PPP1R14DQ9NXH3 145 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 CELA1Q9UNI1 258 aa8.69□□□□□ -1.02
TPM1-216ENST00000558910 A0A0J9YX75 114 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
TPM1-216ENST00000558910 M0R2Z0 102 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 PRAF2O60831 178 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 PRM2P04554 102 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 S100A11P31949 105 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 HBG1P69891 147 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 HBG2P69892 147 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 IL15RAQ13261 267 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 OPCMLQ14982 345 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 Q6ZRG5 221 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 TMEM37Q8WXS4 190 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 GPR82Q96P67 336 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 TMEM208Q9BTX3 173 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 SMIM3Q9BZL3 60 aa8.68□□□□□ -1.02
TPM1-216ENST00000558910 C11orf68Q9H3H3 251 aaKnown RBP8.68□□□□□ -1.02
TPM1-216ENST00000558910 SEPSECSQ9HD40 501 aaKnown RBP8.68□□□□□ -1.02
TPM1-216ENST00000558910 KLK5Q9Y337 293 aaPredicted RBP8.68□□□□□ -1.02
TPM1-216ENST00000558910 TRAV12-2A0A075B6T6 113 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 IGLL5B9A064 214 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 FNDC10F2Z333 226 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 H0YIZ8 118 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 J3KRW8 73 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 MIFP14174 115 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 CNN1P51911 297 aaKnown RBP8.67□□□□□ -1.02
TPM1-216ENST00000558910 H2BFSP57053 126 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 PLP1P60201 277 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 B2MP61769 119 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 GCSAMLQ5JQS6 135 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 Q6ZTC4 211 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 S100A7AQ86SG5 101 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 DNAJC4Q9NNZ3 241 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 WDR83OSQ9Y284 106 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 PXMP4Q9Y6I8 212 aa8.67□□□□□ -1.02
TPM1-216ENST00000558910 ZNF705EA8MWA4 302 aaPredicted RBP8.66□□□□□ -1.02
TPM1-216ENST00000558910 E5RGE8 158 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 NPIPB6E9PJ23 425 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 SLC17A3O00476 420 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 HTN1P15515 57 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 ZNF709Q8N972 641 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 PPP1R1CQ8WVI7 109 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 MARVELD1Q9BSK0 173 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 PARD6GQ9BYG4 376 aaPredicted RBP8.66□□□□□ -1.02
TPM1-216ENST00000558910 NMES1Q9C002 83 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 SLC25A31Q9H0C2 315 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 GOLT1BQ9Y3E0 138 aa8.66□□□□□ -1.02
TPM1-216ENST00000558910 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
TPM1-216ENST00000558910 MED14OSP0DP75 135 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 HTN3P15516 51 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 CXCL3P19876 107 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 PSG3Q16557 428 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 SAMD13Q5VXD3 122 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 SPATA31B1PQ5VZV4 182 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 OR11H7Q8NGC8 314 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 OR1L4Q8NGR5 311 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 BLNKQ8WV28 456 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
TPM1-216ENST00000558910 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
TPM1-216ENST00000558910 ALG5Q9Y673 324 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms