RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 TRPT1Q86TN4 253 aaKnown RBP12.33□□□□□ -0.44
PBX4-202ENST00000557978 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
PBX4-202ENST00000557978 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
PBX4-202ENST00000557978 IGLC2P0DOY2 106 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 SPP1P10451 314 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
PBX4-202ENST00000557978 RPL7L1Q6DKI1 246 aaKnown RBP12.32□□□□□ -0.44
PBX4-202ENST00000557978 MIR17HGQ75NE6 70 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
PBX4-202ENST00000557978 TRAV8-2A0A0B4J237 113 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 A0A0D9SG52 128 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 A0A1W2PPV4 95 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 H3BMM0 161 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 MBP02144 154 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
PBX4-202ENST00000557978 TAS2R45P59539 299 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 TMEM41BQ5BJD5 291 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 OR11H4Q8NGC9 324 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 SLC25A2Q9BXI2 301 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 OR51M1Q9H341 326 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 ZNF331Q9NQX6 463 aaPredicted RBP12.31□□□□□ -0.44
PBX4-202ENST00000557978 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
PBX4-202ENST00000557978 hCG_2014768A0A024R1R8 64 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 H3BQ15 152 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 ZNF253O75346 499 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 PDE6HQ13956 83 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 PSG3Q16557 428 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 ARPC5LQ9BPX5 153 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 RFNGQ9Y644 331 aa12.3□□□□□ -0.44
PBX4-202ENST00000557978 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
PBX4-202ENST00000557978 PSG9Q00887 426 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 DEFB135Q30KP9 77 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 GDF5OSQ5U4N7 250 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 RNF182Q8N6D2 247 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 ZNF738Q8NE65 137 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
PBX4-202ENST00000557978 FAM167A-AS1Q96KT0 104 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 PAXXQ9BUH6 204 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 ZNF586Q9NXT0 402 aa12.29□□□□□ -0.44
PBX4-202ENST00000557978 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 A0A0J9YX75 114 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 SPRY2O43597 315 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 OR7C2O60412 319 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 CA1P00915 261 aaPredicted RBP12.28□□□□□ -0.44
PBX4-202ENST00000557978 PYYP10082 97 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 RNF183Q96D59 192 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 H3BTX0 84 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 DUSP14O95147 198 aaKnown RBP12.28□□□□□ -0.44
PBX4-202ENST00000557978 NBEAP1P0C6P0 100 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 DEFB1P60022 68 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 OR4B1Q8NGF8 309 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 OVOL2Q9BRP0 275 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 CYTL1Q9NRR1 136 aa12.28□□□□□ -0.44
PBX4-202ENST00000557978 F6UB75 175 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 SLC17A3O00476 420 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 HLA-DMBP28068 263 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 RAB2AP61019 212 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 FAM122CQ6P4D5 195 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 PQLC2Q6ZP29 291 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 BLNKQ8WV28 456 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 RPUSD4Q96CM3 377 aaKnown RBP12.27□□□□□ -0.45
PBX4-202ENST00000557978 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 RETNQ9HD89 108 aa12.27□□□□□ -0.45
PBX4-202ENST00000557978 C1QBP02746 253 aa12.26□□□□□ -0.45
PBX4-202ENST00000557978 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
PBX4-202ENST00000557978 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
PBX4-202ENST00000557978 BCL2L11O43521 198 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 PFDN1O60925 122 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 IGKV3-20P01619 116 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 OR10J4P0C629 311 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 EIF5AP63241 154 aaKnown RBP12.25□□□□□ -0.45
PBX4-202ENST00000557978 UBE2L3P68036 154 aaKnown RBP12.25□□□□□ -0.45
PBX4-202ENST00000557978 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
PBX4-202ENST00000557978 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 FXYD5Q96DB9 178 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 HYLS1Q96M11 299 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
PBX4-202ENST00000557978 NDUFB4O95168 129 aa12.24□□□□□ -0.45
PBX4-202ENST00000557978 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
PBX4-202ENST00000557978 TMUB2Q71RG4 321 aa12.24□□□□□ -0.45
PBX4-202ENST00000557978 MRPL53Q96EL3 112 aaKnown RBP12.24□□□□□ -0.45
PBX4-202ENST00000557978 RARRES2Q99969 163 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms