RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 PSG3Q16557 428 aa11.98□□□□□ -0.49
NEDD4-212ENST00000557845 C10orf113Q5VZT2 155 aa11.98□□□□□ -0.49
NEDD4-212ENST00000557845 Q6ZRG5 221 aa11.98□□□□□ -0.49
NEDD4-212ENST00000557845 DNAJC4Q9NNZ3 241 aa11.98□□□□□ -0.49
NEDD4-212ENST00000557845 RFNGQ9Y644 331 aa11.98□□□□□ -0.49
NEDD4-212ENST00000557845 INMT-MINDY4F8WBC2 141 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 SIX6O95475 246 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 SPART-AS1P0CW21 52 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 EMP1P54849 157 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 HBG1P69891 147 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 HBG2P69892 147 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 PRR20EP86478 221 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 PRR20CP86479 221 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 PRR20DP86480 221 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 PRR20BP86481 221 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 PRR20AP86496 221 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 ATP6V1FQ16864 119 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 STX12Q86Y82 276 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
NEDD4-212ENST00000557845 DEFB131BA0A096LNP1 70 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.49
NEDD4-212ENST00000557845 PRAF2O60831 178 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 HBE1P02100 147 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 AMBPP02760 352 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 SNRPCP09234 159 aaKnown RBP11.96□□□□□ -0.49
NEDD4-212ENST00000557845 CXCL2P19875 107 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 RPL29P47914 159 aaKnown RBP11.96□□□□□ -0.49
NEDD4-212ENST00000557845 OPCMLQ14982 345 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 SPINK13Q1W4C9 94 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 OR8A1Q8NGG7 326 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.49
NEDD4-212ENST00000557845 ZNF331Q9NQX6 463 aaPredicted RBP11.96□□□□□ -0.49
NEDD4-212ENST00000557845 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 UBE2L5PA0A1B0GUS4 154 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 M0R2Z0 102 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 RLN2P04090 185 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 BAXQ07812 192 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 LCN15Q6UWW0 184 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 RPP25LQ8N5L8 163 aaKnown RBP11.95□□□□□ -0.5
NEDD4-212ENST00000557845 OR1L4Q8NGR5 311 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 SLC50A1Q9BRV3 221 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 MARVELD1Q9BSK0 173 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 TMEM208Q9BTX3 173 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 NMES1Q9C002 83 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
NEDD4-212ENST00000557845 KMT2AQ03164 3969 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 B2MP61769 119 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 RHOBP62745 196 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 HIST1H1AQ02539 215 aaPredicted RBP11.94□□□□□ -0.5
NEDD4-212ENST00000557845 NHLH2Q02577 135 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
NEDD4-212ENST00000557845 PFDN5Q99471 154 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 RNF126Q9BV68 326 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 BATF3Q9NR55 127 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
NEDD4-212ENST00000557845 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 E5RGE8 158 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
NEDD4-212ENST00000557845 FGF7P21781 194 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 CYCSP99999 105 aaKnown RBP11.93□□□□□ -0.5
NEDD4-212ENST00000557845 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 NIPSNAP3BQ9BS92 247 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 OR5AC2Q9NZP5 309 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 YTHDF2Q9Y5A9 579 aaKnown RBP11.93□□□□□ -0.5
NEDD4-212ENST00000557845 VPS13DQ5THJ4 4388 aa11.93□□□□□ -0.5
NEDD4-212ENST00000557845 BIRC6Q9NR09 4857 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 TEX48A0A1B0GUV7 120 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 H0YIZ8 118 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 H3BQ15 152 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 H3BTX0 84 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 BOLA2-SMG1P6H3BVE0 249 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 MPDU1O75352 247 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 INSP01308 110 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 DEFA1P59665 94 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 DEFA3P59666 94 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 SAT2Q96F10 170 aaPredicted RBP11.92□□□□□ -0.5
NEDD4-212ENST00000557845 SLC25A31Q9H0C2 315 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 PXMP4Q9Y6I8 212 aa11.92□□□□□ -0.5
NEDD4-212ENST00000557845 SLC17A3O00476 420 aa11.91□□□□□ -0.5
NEDD4-212ENST00000557845 PRM2P04554 102 aa11.91□□□□□ -0.5
NEDD4-212ENST00000557845 GUK1Q16774 197 aa11.91□□□□□ -0.5
NEDD4-212ENST00000557845 BAP18Q8IXM2 172 aa11.91□□□□□ -0.5
NEDD4-212ENST00000557845 OR5C1Q8NGR4 320 aa11.91□□□□□ -0.5
NEDD4-212ENST00000557845 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
NEDD4-212ENST00000557845 H2BFSP57053 126 aa11.9□□□□□ -0.5
NEDD4-212ENST00000557845 OXA1LQ15070 435 aa11.9□□□□□ -0.5
NEDD4-212ENST00000557845 NPCDR1Q9BY65 106 aa11.9□□□□□ -0.5
NEDD4-212ENST00000557845 ZNF586Q9NXT0 402 aa11.9□□□□□ -0.5
NEDD4-212ENST00000557845 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms