RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PSG3Q16557 428 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 PXDC1Q5TGL8 231 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 MITD1Q8WV92 249 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 C20orf85Q9H1P6 137 aa10.37□□□□□ -0.75
SHMT2-235ENST00000557740 L7N2F9 121 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 RTL8CO15255 209 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 COX7A2P2O60397 106 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 DEFB130BP0DP73 79 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 DEFB130AP0DP74 79 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 CXCL2P19875 107 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 VAMP2P63027 116 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 RNF212Q495C1 297 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 LCN15Q6UWW0 184 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
SHMT2-235ENST00000557740 LINC01587Q99440 93 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 GGACTQ9BVM4 153 aa10.36□□□□□ -0.75
SHMT2-235ENST00000557740 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 C7orf66A4D0T2 115 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 FAM25EA8MYX2 175 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 AGPAT2O15120 278 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-235ENST00000557740 PRM2P04554 102 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 PATE2Q6UY27 113 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
SHMT2-235ENST00000557740 CCSO14618 274 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-235ENST00000557740 BCAP31P51572 246 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 TAS2R60P59551 318 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 SOHLH1Q5JUK2 328 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 BPIFA4PQ86YQ2 179 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
SHMT2-235ENST00000557740 LSM5Q9Y4Y9 91 aaKnown RBP10.34□□□□□ -0.75
SHMT2-235ENST00000557740 F5H768 121 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
SHMT2-235ENST00000557740 LYRM1O43325 122 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 HTN1P15515 57 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 AZU1P20160 251 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 CDKN1BP46527 198 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 CAV2P51636 162 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-235ENST00000557740 RAB31Q13636 194 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 Q6ZR54 194 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 MGST2Q99735 147 aa10.33□□□□□ -0.76
SHMT2-235ENST00000557740 ZNF331Q9NQX6 463 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-235ENST00000557740 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 C5orf51A6NDU8 294 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 ATP5G1P05496 136 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
SHMT2-235ENST00000557740 ATP5G3P48201 142 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 CAMLGP49069 296 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 OR10J6PQ8NGY7 276 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
SHMT2-235ENST00000557740 H3BTX0 84 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 SLC17A3O00476 420 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 PLA2G10O15496 165 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 TCRBP04435 133 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 OPCMLQ14982 345 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 FCN2Q15485 313 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 Q6ZRG5 221 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-235ENST00000557740 NUDT15Q9NV35 164 aa10.31□□□□□ -0.76
SHMT2-235ENST00000557740 TIMM8BQ9Y5J9 83 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-235ENST00000557740 TRAV6A0A075B6T7 132 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 H7BYZ3 331 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 CST7O76096 145 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 NUDT3O95989 172 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 PVALBP20472 110 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-235ENST00000557740 S100A10P60903 97 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 C1orf134Q5TEV5 83 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
SHMT2-235ENST00000557740 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 SEC22CQ9BRL7 303 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 UQCC1Q9NVA1 299 aa10.3□□□□□ -0.76
SHMT2-235ENST00000557740 CBY3A6NI87 242 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 MORN5Q5VZ52 161 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 NRARPQ7Z6K4 114 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 C12orf45Q8N5I9 185 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-235ENST00000557740 OR1L4Q8NGR5 311 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 RNASE8Q8TDE3 154 aaKnown RBP10.29□□□□□ -0.76
SHMT2-235ENST00000557740 PFDN5Q99471 154 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 C20orf144Q9BQM9 153 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 DNAJC4Q9NNZ3 241 aa10.29□□□□□ -0.76
SHMT2-235ENST00000557740 NOP10Q9NPE3 64 aaKnown RBP10.29□□□□□ -0.76
SHMT2-235ENST00000557740 UBE2L5PA0A1B0GUS4 154 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 FAM24AA6NFZ4 105 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 IGLC2P0DOY2 106 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 BAXQ07812 192 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 GUK1Q16774 197 aa10.28□□□□□ -0.76
SHMT2-235ENST00000557740 STX12Q86Y82 276 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms