RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	ZNF493	Q6ZR52	646 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	TBC1D26	Q86UD7	250 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	BAP18	Q8IXM2	172 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	TMEM256	Q8N2U0	113 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	OR11H7	Q8NGC8	314 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	OR1S2	Q8NGQ3	325 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	MITD1	Q8WV92	249 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	SHPK	Q9UHJ6	478 aa		6.29	□□□□□ -1.4
PABPN1-208	ENST00000557702	C3orf85	A0A1B0GTC6	90 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GAGE12B	A1L429	117 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	ZNF98	A6NK75	572 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	SOCS3	O14543	225 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	PFDN1	O60925	122 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	PGLYRP1	O75594	196 aa	Predicted RBP	6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GAGE7	O76087	117 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	RLN2	P04090	185 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	OR5AC1	P0C628	307 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GAGE12F	P0CL80	117 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GAGE12G	P0CL81	117 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GAGE12I	P0CL82	117 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	SULT1A3	P0DMM9	295 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	SULT1A4	P0DMN0	295 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	EVI2A	P22794	236 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	NUP62	P37198	522 aa	Predicted RBP	6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	SPINK9	Q5DT21	86 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	H2BFWT	Q7Z2G1	175 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	LINC00612	Q8N6U2	182 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	GPR146	Q96CH1	333 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	VSIG2	Q96IQ7	327 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	PFDN2	Q9UHV9	154 aa		6.28	□□□□□ -1.4
PABPN1-208	ENST00000557702	TRAV12-2	A0A075B6T6	113 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	B3GALNT1	O75752	331 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	CCNK	O75909	580 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	DUSP14	O95147	198 aa	Known RBP	6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	IGLC1	P0CG04	106 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	UCP1	P25874	307 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	OR10J1	P30954	320 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	SP6	Q3SY56	376 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	SAMD13	Q5VXD3	122 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	AKAP14	Q86UN6	197 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	LRTM2	Q8N967	370 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	RNASE8	Q8TDE3	154 aa	Known RBP	6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	GLYATL2	Q8WU03	294 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	TMEM263	Q8WUH6	116 aa	Known RBP	6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	TP53RK	Q96S44	253 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	LINC00467	Q9BRT7	94 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	PRR13	Q9NZ81	148 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	MGAT4C	Q9UBM8	478 aa		6.27	□□□□□ -1.41
PABPN1-208	ENST00000557702	FAT4	Q6V0I7	4981 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	PIGBOS1	A0A0B4J2F0	54 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	INS-IGF2	F8WCM5	200 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	GOSR2	O14653	212 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	RD3L	P0DJH9	198 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	RNASE2	P10153	161 aa	Known RBP	6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	CXCL3	P19876	107 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	CNN1	P51911	297 aa	Known RBP	6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	SRPX	P78539	464 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	LYPD5	Q6UWN5	251 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	LGI3	Q8N145	548 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	C10orf126	Q8N4M7	172 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	ST6GAL2	Q96JF0	529 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	C16orf92	Q96LL3	132 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	C20orf173	Q96LM9	149 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	CHAC1	Q9BUX1	264 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	TMEM222	Q9H0R3	208 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	TMPRSS5	Q9H3S3	457 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	ICOS	Q9Y6W8	199 aa		6.26	□□□□□ -1.41
PABPN1-208	ENST00000557702	TRAV5	A0A0B4J249	113 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	DUXB	A0A1W2PPF3	345 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	CDS2	O95674	445 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	HNRNPA3	P51991	378 aa	Known RBP	6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	RND2	P52198	227 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	RPL37A	P61513	92 aa	Known RBP	6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	SELENOH	Q8IZQ5	122 aa	Known RBP	6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	SLC35G3	Q8N808	338 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	OR51G1	Q8NGK1	321 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	LHFPL5	Q8TAF8	219 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	RBPMS	Q93062	196 aa	Known RBP	6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	IL22RA2	Q969J5	263 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	PPP1R14B	Q96C90	147 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	SEC22A	Q96IW7	307 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	DNAJC4	Q9NNZ3	241 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	TMEM56-RWDD3	S4R434	201 aa		6.25	□□□□□ -1.41
PABPN1-208	ENST00000557702	BOLA2-SMG1P6	H3BVE0	249 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	CCS	O14618	274 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	SIX6	O95475	246 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	TOMM40	O96008	361 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	IGKV1-39	P01597	117 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	IGLV2-8	P01709	118 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	IGKV1D-39	P04432	117 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	CRYGD	P07320	174 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	HOXB5	P09067	269 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	GIP	P09681	153 aa	Predicted RBP	6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	SLC25A4	P12235	298 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	CD300C	Q08708	224 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	C1orf194	Q5T5A4	169 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	TMEM268	Q5VZI3	342 aa		6.24	□□□□□ -1.41
PABPN1-208	ENST00000557702	LYZL2	Q7Z4W2	148 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms