RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 C17orf77Q96MU5 243 aa12.19□□□□□ -0.46
NEK9-211ENST00000557673 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
NEK9-211ENST00000557673 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
NEK9-211ENST00000557673 PCLOQ9Y6V0 5065 aa12.19□□□□□ -0.46
NEK9-211ENST00000557673 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
NEK9-211ENST00000557673 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
NEK9-211ENST00000557673 FFAR4Q5NUL3 377 aa12.18□□□□□ -0.46
NEK9-211ENST00000557673 RPL7L1Q6DKI1 246 aaKnown RBP12.18□□□□□ -0.46
NEK9-211ENST00000557673 KCNRGQ8N5I3 272 aa12.18□□□□□ -0.46
NEK9-211ENST00000557673 HSD17B11Q8NBQ5 300 aa12.18□□□□□ -0.46
NEK9-211ENST00000557673 RFNGQ9Y644 331 aa12.18□□□□□ -0.46
NEK9-211ENST00000557673 A0A087X0K7 114 aa12.17□□□□□ -0.46
NEK9-211ENST00000557673 ZNF688P0C7X2 276 aa12.17□□□□□ -0.46
NEK9-211ENST00000557673 MEOX2P50222 304 aa12.17□□□□□ -0.46
NEK9-211ENST00000557673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.17□□□□□ -0.46
NEK9-211ENST00000557673 PSMG3Q9BT73 122 aaPredicted RBP12.17□□□□□ -0.46
NEK9-211ENST00000557673 BORCS7-ASMTA0A0B4J1R7 106 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 TAAR5O14804 337 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 C1QBP02746 253 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 CXCL2P19875 107 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 ATP6V0CP27449 155 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 PSMB3P49720 205 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 DEFB131AP59861 70 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 SAMD13Q5VXD3 122 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 SPATA31B1PQ5VZV4 182 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
NEK9-211ENST00000557673 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
NEK9-211ENST00000557673 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
NEK9-211ENST00000557673 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 TCTAP57738 103 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 CD300CQ08708 224 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 FAM78BQ5VT40 261 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 RARRES2Q99969 163 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 ARPC5LQ9BPX5 153 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 CSTL1Q9H114 145 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 CYTL1Q9NRR1 136 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 AGRNO00468 2067 aa12.15□□□□□ -0.46
NEK9-211ENST00000557673 A0A0D9SG52 128 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 ISLRO14498 428 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 BCL2L11O43521 198 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 IGLC2P0DOY2 106 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 SNRPD3P62318 126 aaKnown RBP12.14□□□□□ -0.47
NEK9-211ENST00000557673 PSMG4Q5JS54 123 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 MIR17HGQ75NE6 70 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
NEK9-211ENST00000557673 M6PRP20645 277 aa12.13□□□□□ -0.47
NEK9-211ENST00000557673 RAB2AP61019 212 aa12.13□□□□□ -0.47
NEK9-211ENST00000557673 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
NEK9-211ENST00000557673 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
NEK9-211ENST00000557673 GNPNAT1Q96EK6 184 aaPredicted RBP12.13□□□□□ -0.47
NEK9-211ENST00000557673 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
NEK9-211ENST00000557673 C11orf68Q9H3H3 251 aaKnown RBP12.13□□□□□ -0.47
NEK9-211ENST00000557673 TMEM14CQ9P0S9 112 aa12.13□□□□□ -0.47
NEK9-211ENST00000557673 TRAV8-2A0A0B4J237 113 aa12.12□□□□□ -0.47
NEK9-211ENST00000557673 ID1P41134 155 aa12.12□□□□□ -0.47
NEK9-211ENST00000557673 RHOBP62745 196 aa12.12□□□□□ -0.47
NEK9-211ENST00000557673 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
NEK9-211ENST00000557673 KANTRA0A1W2PQU2 76 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 H3BQ15 152 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 SLC17A3O00476 420 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 PYYP10082 97 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 SERF2P84101 59 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 TMUB2Q71RG4 321 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 C20orf173Q96LM9 149 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 HRH4Q9H3N8 390 aa12.11□□□□□ -0.47
NEK9-211ENST00000557673 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
NEK9-211ENST00000557673 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
NEK9-211ENST00000557673 KHDC3LQ587J8 217 aa12.1□□□□□ -0.47
NEK9-211ENST00000557673 OR11H2Q8NH07 326 aa12.1□□□□□ -0.47
NEK9-211ENST00000557673 HYLS1Q96M11 299 aa12.1□□□□□ -0.47
NEK9-211ENST00000557673 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
NEK9-211ENST00000557673 KNCNA6PVL3 124 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 H3BTX0 84 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 PFDN1O60925 122 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 CA1P00915 261 aaPredicted RBP12.09□□□□□ -0.47
NEK9-211ENST00000557673 GUK1Q16774 197 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 ZFP69Q49AA0 526 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 FAM122CQ6P4D5 195 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 RNF182Q8N6D2 247 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 OR10G9Q8NGN4 311 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 OR10G7Q8NGN6 311 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
NEK9-211ENST00000557673 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
NEK9-211ENST00000557673 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 DNAH10Q8IVF4 4471 aa12.09□□□□□ -0.47
NEK9-211ENST00000557673 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
NEK9-211ENST00000557673 OR7C2O60412 319 aa12.08□□□□□ -0.48
NEK9-211ENST00000557673 ZNF253O75346 499 aa12.08□□□□□ -0.48
NEK9-211ENST00000557673 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
NEK9-211ENST00000557673 MBP02144 154 aa12.08□□□□□ -0.48
NEK9-211ENST00000557673 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
NEK9-211ENST00000557673 SPP1P10451 314 aa12.08□□□□□ -0.48
NEK9-211ENST00000557673 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms