RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
TMEM260-215ENST00000557626 RPL7L1Q6DKI1 246 aaKnown RBP9.33□□□□□ -0.92
TMEM260-215ENST00000557626 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
TMEM260-215ENST00000557626 TMUB2Q71RG4 321 aa9.33□□□□□ -0.92
TMEM260-215ENST00000557626 LILRB2Q8N423 598 aa9.33□□□□□ -0.92
TMEM260-215ENST00000557626 INO80EQ8NBZ0 244 aaPredicted RBP9.33□□□□□ -0.92
TMEM260-215ENST00000557626 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
TMEM260-215ENST00000557626 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
TMEM260-215ENST00000557626 IGHV3OR16-8A0A075B7F1 116 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-215ENST00000557626 AGPAT2O15120 278 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 PSG1P11464 419 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 ELLP55199 621 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-215ENST00000557626 KRTAP10-1P60331 282 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-215ENST00000557626 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 X6R8D5 127 aa9.32□□□□□ -0.92
TMEM260-215ENST00000557626 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 A0A0D9SG52 128 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 ZFP92A6NM28 416 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 NUPL2O15504 423 aaKnown RBP9.31□□□□□ -0.92
TMEM260-215ENST00000557626 TOMM40O96008 361 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 IFNA5P01569 189 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 FGF7P21781 194 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 ASIPP42127 132 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 OPCMLQ14982 345 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 TEPPQ6URK8 271 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 CYP2G1PQ6ZSU1 146 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
TMEM260-215ENST00000557626 BCL2L11O43521 198 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 DFFBO76075 338 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 YIF1AO95070 293 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 OXTP01178 125 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
TMEM260-215ENST00000557626 NUP62P37198 522 aaPredicted RBP9.3□□□□□ -0.92
TMEM260-215ENST00000557626 CMC4P56277 68 aaPredicted RBP9.3□□□□□ -0.92
TMEM260-215ENST00000557626 USF2Q15853 346 aaPredicted RBP9.3□□□□□ -0.92
TMEM260-215ENST00000557626 MIC13Q5XKP0 118 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 ZNF600Q6ZNG1 722 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 TMEM190Q8WZ59 177 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 ARL6Q9H0F7 186 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 PUS1Q9Y606 427 aaKnown RBP eCLIP9.3□□□□□ -0.92
TMEM260-215ENST00000557626 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
TMEM260-215ENST00000557626 NDUFA4O00483 81 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
TMEM260-215ENST00000557626 APOHP02749 345 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-215ENST00000557626 RD3LP0DJH9 198 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 CAMLGP49069 296 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-215ENST00000557626 BPIFCQ8NFQ6 507 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 U3KQE9 123 aa9.29□□□□□ -0.92
TMEM260-215ENST00000557626 TAAR5O14804 337 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 ATP6V0CP27449 155 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 RPL29P47914 159 aaKnown RBP9.28□□□□□ -0.92
TMEM260-215ENST00000557626 PLP1P60201 277 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 GCSAMLQ5JQS6 135 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 OR51G1Q8NGK1 321 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 GINS3Q9BRX5 216 aa9.28□□□□□ -0.92
TMEM260-215ENST00000557626 MPDU1O75352 247 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 IL4P05112 153 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-215ENST00000557626 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 TMEM88Q6PEY1 159 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 Q8WTZ3 238 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 TMEM37Q8WXS4 190 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 RNF125Q96EQ8 232 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 VSIRQ9H7M9 311 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 SLC39A9Q9NUM3 307 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 PXMP4Q9Y6I8 212 aa9.27□□□□□ -0.93
TMEM260-215ENST00000557626 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 K7EMT4 169 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 EREGO14944 169 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 HTN3P15516 51 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 CRYBB3P26998 211 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 SELENOTP62341 195 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 ZNF266Q14584 549 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 STOML3Q8TAV4 291 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 DOK5Q9P104 306 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 TIMM9Q9Y5J7 89 aa9.26□□□□□ -0.93
TMEM260-215ENST00000557626 IGHV3OR16-13A0A075B7E8 117 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 BORCS7-ASMTA0A0B4J1R7 106 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 IGHV3-74A0A0B4J1X5 117 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 KANTRA0A1W2PQU2 76 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-215ENST00000557626 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-215ENST00000557626 SPP1P10451 314 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 TFPI2P48307 235 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 LYZP61626 148 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 B2MP61769 119 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms