RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 CMTM2Q8TAZ6 248 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 BLNKQ8WV28 456 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 CITED4Q96RK1 184 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 CLEC5AQ9NY25 188 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 SMPXQ9UHP9 88 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 IGHV3-49A0A0A0MS15 119 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 IGHV3-66A0A0C4DH42 116 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 A0A1W2PRE2 83 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 C11orf94C9JXX5 98 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 OVOL1O14753 267 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 PDE6DO43924 150 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 NDUFS6O75380 124 aaKnown RBP8.03□□□□□ -1.12
PRKCH-227ENST00000557599 CSN1S1P47710 185 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 CCL20P78556 96 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 MEF2BQ02080 365 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-227ENST00000557599 TM4SF20Q53R12 229 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 MORN5Q5VZ52 161 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 C16orf54Q6UWD8 224 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 LYPD1Q8N2G4 141 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
PRKCH-227ENST00000557599 OR9G4Q8NGQ1 327 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 RXFP4Q8TDU9 374 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 RAX2Q96IS3 184 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 TCEAL7Q9BRU2 100 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 SLC50A1Q9BRV3 221 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 U3KQE9 123 aa8.03□□□□□ -1.12
PRKCH-227ENST00000557599 IGHV3OR16-13A0A075B7E8 117 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 IGHV3-74A0A0B4J1X5 117 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 C2orf70A6NJV1 201 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 CHEK1O14757 476 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 PAFAH1B2P68402 229 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 FHL3Q13643 280 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 RPUSD4Q96CM3 377 aaKnown RBP8.02□□□□□ -1.13
PRKCH-227ENST00000557599 FXYD5Q96DB9 178 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 OTORQ9NRC9 128 aa8.02□□□□□ -1.13
PRKCH-227ENST00000557599 TRBV19A0A075B6N1 114 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 A0A087X0K7 114 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 FAM74A7A6NL05 159 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 K7EQM0 130 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 DNASE2O00115 360 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-227ENST00000557599 ZNF253O75346 499 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 SLC25A5P05141 298 aaKnown RBP8.01□□□□□ -1.13
PRKCH-227ENST00000557599 FOLR2P14207 255 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 ID1P41134 155 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 CEBPGP53567 150 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 RANP62826 216 aaKnown RBP8.01□□□□□ -1.13
PRKCH-227ENST00000557599 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 GLMPQ8WWB7 406 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 DLX4Q92988 240 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-227ENST00000557599 ZNF503Q96F45 646 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 SLC35B3Q9H1N7 401 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
PRKCH-227ENST00000557599 PGPA6NDG6 321 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 KRBOX1C9JBD0 128 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 TMEM250H0YL14 139 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 IGLC2P0DOY2 106 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 S100A1P23297 94 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 CBLN1P23435 193 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
PRKCH-227ENST00000557599 ICAM4Q14773 271 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 SOHLH1Q5JUK2 328 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
PRKCH-227ENST00000557599 C5orf17Q8NAS9 161 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 ZNF414Q96IQ9 312 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 C16orf92Q96LL3 132 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 RARRES2Q99969 163 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 Q9H3A6 140 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 NRN1Q9NPD7 142 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 ZNF586Q9NXT0 402 aa8□□□□□ -1.13
PRKCH-227ENST00000557599 YTHDF2Q9Y5A9 579 aaKnown RBP8□□□□□ -1.13
PRKCH-227ENST00000557599 H3BQ15 152 aa7.99□□□□□ -1.13
PRKCH-227ENST00000557599 APOHP02749 345 aaPredicted RBP7.99□□□□□ -1.13
PRKCH-227ENST00000557599 AKR1C3P42330 323 aa7.99□□□□□ -1.13
PRKCH-227ENST00000557599 ATP5G3P48201 142 aa7.99□□□□□ -1.13
PRKCH-227ENST00000557599 CNN1P51911 297 aaKnown RBP7.99□□□□□ -1.13
PRKCH-227ENST00000557599 HIST1H2BAQ96A08 127 aa7.99□□□□□ -1.13
PRKCH-227ENST00000557599 AURKAIP1Q9NWT8 199 aaPredicted RBP7.99□□□□□ -1.13
PRKCH-227ENST00000557599 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SERTM2A0A1B0GWG4 89 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 F8W036 122 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 H3BTX0 84 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 MRPS12O15235 138 aaKnown RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 ATP6V1G1O75348 118 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SAP30O75446 220 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 PRB2P02812 416 aaPredicted RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 S100A9P06702 114 aaKnown RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SRP19P09132 144 aaKnown RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SNRPCP09234 159 aaKnown RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 SNRPD3P62318 126 aaKnown RBP7.98□□□□□ -1.13
PRKCH-227ENST00000557599 FAM74A3Q4VXF1 159 aa7.98□□□□□ -1.13
PRKCH-227ENST00000557599 MCRIP2Q9BUT9 160 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms