RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 FBN3Q75N90 2809 aa12.37□□□□□ -0.43
PCNX4-213ENST00000556907 PYYP10082 97 aa12.37□□□□□ -0.43
PCNX4-213ENST00000556907 BCL2P10415 239 aa12.37□□□□□ -0.43
PCNX4-213ENST00000556907 RPL7P18124 248 aaKnown RBP12.37□□□□□ -0.43
PCNX4-213ENST00000556907 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
PCNX4-213ENST00000556907 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
PCNX4-213ENST00000556907 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
PCNX4-213ENST00000556907 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
PCNX4-213ENST00000556907 GLMPQ8WWB7 406 aa12.37□□□□□ -0.43
PCNX4-213ENST00000556907 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-213ENST00000556907 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 DEFA6Q01524 100 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 ZNF506Q5JVG8 444 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 C16orf54Q6UWD8 224 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 GNG13Q9P2W3 67 aa12.36□□□□□ -0.43
PCNX4-213ENST00000556907 A0A087X0K7 114 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 TSPAN4O14817 238 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 OR10J4P0C629 311 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
PCNX4-213ENST00000556907 EDN2P20800 178 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 GUK1Q16774 197 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 TOR2AQ5JU69 321 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 OR8I2Q8N0Y5 310 aa12.35□□□□□ -0.43
PCNX4-213ENST00000556907 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
PCNX4-213ENST00000556907 AURKAIP1Q9NWT8 199 aaPredicted RBP12.35□□□□□ -0.43
PCNX4-213ENST00000556907 NDUFS6O75380 124 aaKnown RBP12.34□□□□□ -0.43
PCNX4-213ENST00000556907 PAFAH1B2P68402 229 aa12.34□□□□□ -0.43
PCNX4-213ENST00000556907 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
PCNX4-213ENST00000556907 IGHV3-49A0A0A0MS15 119 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 A0A1W2PRE2 83 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 HELTA6NFD8 242 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 RBFOX3A6NFN3 312 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 FAM74A7A6NL05 159 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 ZNF785A8K8V0 405 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 GALR1P47211 349 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 PDE6HQ13956 83 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 ICAM4Q14773 271 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 HAGHQ16775 308 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 FAM90A2PQ658T7 463 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 TXNDC17Q9BRA2 123 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 ZNF586Q9NXT0 402 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
PCNX4-213ENST00000556907 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 IZUMO1RA6ND01 250 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 PAGE4O60829 102 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 ZNF253O75346 499 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-213ENST00000556907 MEOX2P50222 304 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 CMC4P56277 68 aaPredicted RBP12.32□□□□□ -0.44
PCNX4-213ENST00000556907 GUCA2BQ16661 112 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
PCNX4-213ENST00000556907 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
PCNX4-213ENST00000556907 TRBV19A0A075B6N1 114 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 H3BQ15 152 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 UBE2G2P60604 165 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
PCNX4-213ENST00000556907 PEA15Q15121 130 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 TCF24Q7RTU0 167 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 PRR25Q96S07 402 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
PCNX4-213ENST00000556907 SMAD5-AS1Q9Y6J3 95 aa12.31□□□□□ -0.44
PCNX4-213ENST00000556907 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
PCNX4-213ENST00000556907 BLNKQ8WV28 456 aa12.3□□□□□ -0.44
PCNX4-213ENST00000556907 C17orf77Q96MU5 243 aa12.3□□□□□ -0.44
PCNX4-213ENST00000556907 RARRES2Q99969 163 aa12.3□□□□□ -0.44
PCNX4-213ENST00000556907 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
PCNX4-213ENST00000556907 C11orf94C9JXX5 98 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 NDUFB4O95168 129 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 ATP5G3P48201 142 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
PCNX4-213ENST00000556907 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 RXFP4Q8TDU9 374 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 SLC50A1Q9BRV3 221 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 NKX6-2Q9C056 277 aaPredicted RBP12.29□□□□□ -0.44
PCNX4-213ENST00000556907 DNAH3Q8TD57 4116 aa12.29□□□□□ -0.44
PCNX4-213ENST00000556907 K7EIL1 84 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 SLC17A3O00476 420 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 CD81P60033 236 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 RPL11P62913 178 aaKnown RBP12.28□□□□□ -0.44
PCNX4-213ENST00000556907 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 MRAPQ8TCY5 172 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 Q9H3A6 140 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 TREM1Q9NP99 234 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
PCNX4-213ENST00000556907 A8MZ25 164 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 F6UZH7 168 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 TMEM250H0YL14 139 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms