RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 EBLN2Q6P2I7 272 aa10.37□□□□□ -0.75
SLIRP-207ENST00000556831 TMEM182Q6ZP80 229 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-207ENST00000556831 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
SLIRP-207ENST00000556831 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
SLIRP-207ENST00000556831 SHANK2-AS3Q9BTD1 123 aa10.37□□□□□ -0.75
SLIRP-207ENST00000556831 RSG1Q9BU20 258 aa10.37□□□□□ -0.75
SLIRP-207ENST00000556831 ZNF471Q9BX82 626 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-207ENST00000556831 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
SLIRP-207ENST00000556831 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-207ENST00000556831 MPDU1O75352 247 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 FGF7P21781 194 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 UHRF2Q96PU4 802 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 PFDN5Q99471 154 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 MGST2Q99735 147 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 RPRMQ9NS64 109 aa10.36□□□□□ -0.75
SLIRP-207ENST00000556831 RAB19A4D1S5 217 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 RNF222A6NCQ9 220 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
SLIRP-207ENST00000556831 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 OR5C1Q8NGR4 320 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 RARRES2Q99969 163 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 KCNIP2Q9NS61 270 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 OR5AC2Q9NZP5 309 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
SLIRP-207ENST00000556831 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 B2MP61769 119 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 CLINT1Q14677 625 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 CASC10Q5T4H9 136 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 BPIFA4PQ86YQ2 179 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 OR11H2Q8NH07 326 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 MBD2Q9UBB5 411 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
SLIRP-207ENST00000556831 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
SLIRP-207ENST00000556831 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
SLIRP-207ENST00000556831 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
SLIRP-207ENST00000556831 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
SLIRP-207ENST00000556831 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-207ENST00000556831 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
SLIRP-207ENST00000556831 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 H3BMM0 161 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 SOCS3O14543 225 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 IGKV3-20P01619 116 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
SLIRP-207ENST00000556831 NHLH2Q02577 135 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 BAP18Q8IXM2 172 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 SLC39A9Q9NUM3 307 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
SLIRP-207ENST00000556831 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
SLIRP-207ENST00000556831 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
SLIRP-207ENST00000556831 IFNA5P01569 189 aa10.31□□□□□ -0.76
SLIRP-207ENST00000556831 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
SLIRP-207ENST00000556831 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-207ENST00000556831 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
SLIRP-207ENST00000556831 TMA7Q9Y2S6 64 aaKnown RBP10.31□□□□□ -0.76
SLIRP-207ENST00000556831 LYSTQ99698 3801 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 A0A087X0K7 114 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 H0YIZ8 118 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 DUSP14O95147 198 aaKnown RBP10.3□□□□□ -0.76
SLIRP-207ENST00000556831 RPL12P30050 165 aaKnown RBP10.3□□□□□ -0.76
SLIRP-207ENST00000556831 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PRR20EP86478 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PRR20CP86479 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PRR20DP86480 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PRR20BP86481 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PRR20AP86496 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PMS2P11Q13670 270 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PATE2Q6UY27 113 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 ATP5SQ99766 215 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 SLC50A1Q9BRV3 221 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PPP1R14DQ9NXH3 145 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 XCL2Q9UBD3 114 aa10.3□□□□□ -0.76
SLIRP-207ENST00000556831 PSG9Q00887 426 aa10.29□□□□□ -0.76
SLIRP-207ENST00000556831 GDF5OSQ5U4N7 250 aa10.29□□□□□ -0.76
SLIRP-207ENST00000556831 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
SLIRP-207ENST00000556831 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
SLIRP-207ENST00000556831 C11orf68Q9H3H3 251 aaKnown RBP10.29□□□□□ -0.76
SLIRP-207ENST00000556831 BORCS7-ASMTA0A0B4J1R7 106 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 A0A0J9YX75 114 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 LCE6AA0A183 80 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 F6UB75 175 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 JTBO76095 146 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 MIFP14174 115 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 DEFB1P60022 68 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 GUK1Q16774 197 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 RNF182Q8N6D2 247 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms