RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 Q6ZRG5 221 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 OR1L4Q8NGR5 311 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 PARD6GQ9BYG4 376 aaPredicted RBP7.07□□□□□ -1.28
SRP54-210ENST00000556380 SMIM3Q9BZL3 60 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 KCNIP2Q9NS61 270 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
SRP54-210ENST00000556380 ID1P41134 155 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 DEFB1P60022 68 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 STHQ8IWL8 128 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 GATAD1Q8WUU5 269 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 RNF183Q96D59 192 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 LINC00052Q96N35 136 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 PFDN5Q99471 154 aa7.06□□□□□ -1.28
SRP54-210ENST00000556380 RNF222A6NCQ9 220 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 H3BQ15 152 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 H3BS24 57 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 SPRY2O43597 315 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 IGLC2P0DOY2 106 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 HLA-DRB4P13762 266 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 IGFL4Q6B9Z1 124 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 BPIFA4PQ86YQ2 179 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 OR2T35Q8NGX2 323 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 FAM167A-AS1Q96KT0 104 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 C16orf92Q96LL3 132 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 SAV1Q9H4B6 383 aaPredicted RBP7.05□□□□□ -1.28
SRP54-210ENST00000556380 TNFSF18Q9UNG2 199 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 RFNGQ9Y644 331 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 HLA-DRB4X5D2U9 266 aa7.05□□□□□ -1.28
SRP54-210ENST00000556380 A0A0J9YX75 114 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 A8MTW9 85 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 C17orf112F2Z3M2 114 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 F6UB75 175 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 IFNA5P01569 189 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 SPP1P10451 314 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
SRP54-210ENST00000556380 DEFB135Q30KP9 77 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 LCE4AQ5TA78 99 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 SPATA31B1PQ5VZV4 182 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 MORN3Q6PF18 240 aaPredicted RBP7.04□□□□□ -1.28
SRP54-210ENST00000556380 FOXI2Q6ZQN5 318 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 ZNF709Q8N972 641 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 CSNK1G2-AS1Q8NCQ2 148 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
SRP54-210ENST00000556380 HRH4Q9H3N8 390 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 TMEM14CQ9P0S9 112 aa7.04□□□□□ -1.28
SRP54-210ENST00000556380 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
SRP54-210ENST00000556380 CXCL2P19875 107 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 C4BPBP20851 252 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 HLA-DMBP28068 263 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 ZNF266Q14584 549 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 Q6ZNX1 250 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 RNF182Q8N6D2 247 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 INO80EQ8NBZ0 244 aaPredicted RBP7.03□□□□□ -1.28
SRP54-210ENST00000556380 SCGB1C1Q8TD33 95 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 SLC25A2Q9BXI2 301 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 ZNF331Q9NQX6 463 aaPredicted RBP7.03□□□□□ -1.28
SRP54-210ENST00000556380 RPRMQ9NS64 109 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 ZNF586Q9NXT0 402 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
SRP54-210ENST00000556380 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
SRP54-210ENST00000556380 SMLR1H3BR10 107 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 H3BTX0 84 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 SLC17A3O00476 420 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 NDUFB4O95168 129 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 CA1P00915 261 aaPredicted RBP7.02□□□□□ -1.29
SRP54-210ENST00000556380 PSG3Q16557 428 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 TMEM41BQ5BJD5 291 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 FFAR4Q5NUL3 377 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 FAM78BQ5VT40 261 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 LCN15Q6UWW0 184 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 AMTNQ6UX39 209 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 TIMM9Q9Y5J7 89 aa7.02□□□□□ -1.29
SRP54-210ENST00000556380 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 FXYD6-FXYD2A0A087WZ82 144 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 PYYP10082 97 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
SRP54-210ENST00000556380 GUK1Q16774 197 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 EBLN2Q6P2I7 272 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 OR11H4Q8NGC9 324 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 SLC50A1Q9BRV3 221 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 MRPL32Q9BYC8 188 aaKnown RBP7.01□□□□□ -1.29
SRP54-210ENST00000556380 CYTL1Q9NRR1 136 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 CLEC5AQ9NY25 188 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 FUT9Q9Y231 359 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
SRP54-210ENST00000556380 DNAH1Q9P2D7 4330 aa7.01□□□□□ -1.29
SRP54-210ENST00000556380 HMSDA8MTL9 139 aa7□□□□□ -1.29
SRP54-210ENST00000556380 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
SRP54-210ENST00000556380 ZNF705EA8MWA4 302 aaPredicted RBP7□□□□□ -1.29
SRP54-210ENST00000556380 PRAC2D3DTV9 90 aa7□□□□□ -1.29
SRP54-210ENST00000556380 TAAR5O14804 337 aa7□□□□□ -1.29
SRP54-210ENST00000556380 ZNF253O75346 499 aa7□□□□□ -1.29
SRP54-210ENST00000556380 IGKV3-20P01619 116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms