RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 UPK3BQ9BT76 320 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 TMEM147Q9BVK8 224 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 NAA50Q9GZZ1 169 aaKnown RBP7.42□□□□□ -1.22
SYNE2-221ENST00000556342 MIXL1Q9H2W2 232 aa7.42□□□□□ -1.22
SYNE2-221ENST00000556342 NOP10Q9NPE3 64 aaKnown RBP7.42□□□□□ -1.22
SYNE2-221ENST00000556342 PAIP2BQ9ULR5 123 aaKnown RBP7.42□□□□□ -1.22
SYNE2-221ENST00000556342 TRAV26-1A0A087WT03 109 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 PITX3O75364 302 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 HTN1P15515 57 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 GATA2P23769 480 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-221ENST00000556342 S100A7P31151 101 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 RHOBP62745 196 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-221ENST00000556342 CTF1Q16619 201 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 TMEM182Q6ZP80 229 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-221ENST00000556342 TMEM144Q7Z5S9 345 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 CLVS1Q8IUQ0 354 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-221ENST00000556342 BPIFCQ8NFQ6 507 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
SYNE2-221ENST00000556342 RXFP4Q8TDU9 374 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 SCGB3A2Q96PL1 93 aa7.41□□□□□ -1.22
SYNE2-221ENST00000556342 FAT1Q14517 4588 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 PRSS46E5RG02 174 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 H3BRN7 92 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF561-AS1K7EIQ3 104 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 RGS5O15539 181 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 M6PRP20645 277 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 DLK1P80370 383 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 OR5I1Q13606 314 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF493Q6ZR52 646 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 TMEM263Q8WUH6 116 aaKnown RBP7.4□□□□□ -1.22
SYNE2-221ENST00000556342 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 PPP1R14DQ9NXH3 145 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 ZNF586Q9NXT0 402 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 SCP2D1Q9UJQ7 156 aa7.4□□□□□ -1.22
SYNE2-221ENST00000556342 MRPS16Q9Y3D3 137 aaKnown RBP7.4□□□□□ -1.22
SYNE2-221ENST00000556342 PIGBOS1A0A0B4J2F0 54 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 A0A0J9YY99 117 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 DUXBA0A1W2PPF3 345 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 ZNF701M0R085 212 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-221ENST00000556342 CTDSP2O14595 271 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 CTDSPLO15194 276 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 ANXA3P12429 323 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 CXCL3P19876 107 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 CDKN1BP46527 198 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 ESRGQ1W209 222 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 SHANK2-AS3Q9BTD1 123 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
SYNE2-221ENST00000556342 A0A087X0K7 114 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 ANKRD20A5PA0PJZ0 165 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 H3BNG1 76 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 MED6O75586 246 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 ADAP1O75689 374 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-221ENST00000556342 RPL7P18124 248 aaKnown RBP7.38□□□□□ -1.23
SYNE2-221ENST00000556342 RPP30P78346 268 aaKnown RBP7.38□□□□□ -1.23
SYNE2-221ENST00000556342 AKR1C1Q04828 323 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 IL18Q14116 193 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-221ENST00000556342 CIB3Q96Q77 187 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-221ENST00000556342 MCUBQ9NWR8 336 aa7.38□□□□□ -1.23
SYNE2-221ENST00000556342 H7BYZ3 331 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 WRBO00258 174 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 IL5P05113 134 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 SLC25A6P12236 298 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 LINC00315P59091 139 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 RAP2BP61225 183 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 PSG3Q16557 428 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 ACOT7LQ6ZUV0 252 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 LYPD1Q8N2G4 141 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
SYNE2-221ENST00000556342 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 GAGE12BA1L429 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 SYNGR2O43760 224 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 HYPMO75409 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 GAGE7O76087 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 RLN2P04090 185 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 LINC00869P0C866 280 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 GAGE12FP0CL80 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 GAGE12GP0CL81 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 GAGE12IP0CL82 117 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 XGP55808 180 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 PLP1P60201 277 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 SPANXN5Q5MJ07 72 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 LRRC20Q8TCA0 184 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 RPUSD4Q96CM3 377 aaKnown RBP7.36□□□□□ -1.23
SYNE2-221ENST00000556342 DIRAS2Q96HU8 199 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 PTTG2Q9NZH5 202 aa7.36□□□□□ -1.23
SYNE2-221ENST00000556342 RABL2AQ9UBK7 228 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms