RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MRPS12O15235 138 aaKnown RBP8.38□□□□□ -1.07
SLIRP-205ENST00000556310 MIFP14174 115 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 CXCL2P19875 107 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 FGF7P21781 194 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 B2MP61769 119 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 NHLH2Q02577 135 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 FGL1Q08830 312 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 C10orf113Q5VZT2 155 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 Q6ZRG5 221 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 Q8NAQ8 132 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 PFDN5Q99471 154 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 XCL2Q9UBD3 114 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 ALG5Q9Y673 324 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
SLIRP-205ENST00000556310 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 CXorf65A6NEN9 183 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 A8MTW9 85 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 F6UB75 175 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 MPC2O95563 127 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 IGKV3-20P01619 116 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 PMS2P11Q13670 270 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 LCN15Q6UWW0 184 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF709Q8N972 641 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 NPCDR1Q9BY65 106 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 DNAJC4Q9NNZ3 241 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 SLC39A9Q9NUM3 307 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 PXMP4Q9Y6I8 212 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 X6R8D5 127 aa8.37□□□□□ -1.07
SLIRP-205ENST00000556310 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 LCE6AA0A183 80 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 NUPR2A6NF83 97 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 CXCL3P19876 107 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 CLINT1Q14677 625 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 FAM78BQ5VT40 261 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 MORN5Q5VZ52 161 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 RNF182Q8N6D2 247 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 THAP6Q8TBB0 222 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 SLC50A1Q9BRV3 221 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 RNF126Q9BV68 326 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 KCNIP2Q9NS61 270 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 MBD2Q9UBB5 411 aa8.36□□□□□ -1.07
SLIRP-205ENST00000556310 DEFB4AO15263 64 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
SLIRP-205ENST00000556310 IGLC2P0DOY2 106 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 PSG9Q00887 426 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 IGFL4Q6B9Z1 124 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF738Q8NE65 137 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 LRRC20Q8TCA0 184 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 MFFQ9GZY8 342 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 SLC35B3Q9H1N7 401 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF331Q9NQX6 463 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-205ENST00000556310 HSPB11Q9Y547 144 aa8.35□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 JTBO76095 146 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF705DP0CH99 300 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 ZNF705BP0CI00 300 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 RBMY1A1P0DJD3 496 aaKnown RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 RBMY1CP0DJD4 496 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 CNN1P51911 297 aaKnown RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 FXYD7P58549 80 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 RBMY1FQ15415 496 aaKnown RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 PSG3Q16557 428 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 AMTNQ6UX39 209 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 NEU1Q99519 415 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 ATP5SQ99766 215 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
SLIRP-205ENST00000556310 HRH4Q9H3N8 390 aa8.34□□□□□ -1.07
SLIRP-205ENST00000556310 TRAV5A0A0B4J249 113 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 SLC17A3O00476 420 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 AMBPP02760 352 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 RPL12P30050 165 aaKnown RBP8.33□□□□□ -1.08
SLIRP-205ENST00000556310 NANOS2P60321 138 aaKnown RBP8.33□□□□□ -1.08
SLIRP-205ENST00000556310 GUK1Q16774 197 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 OR11H7Q8NGC8 314 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 OR8A1Q8NGG7 326 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 PHLDA1Q8WV24 401 aaPredicted RBP8.33□□□□□ -1.08
SLIRP-205ENST00000556310 MED28Q9H204 178 aa8.33□□□□□ -1.08
SLIRP-205ENST00000556310 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 C17orf112F2Z3M2 114 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 H3BQ15 152 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 ZNF253O75346 499 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 SNRPCP09234 159 aaKnown RBP8.32□□□□□ -1.08
SLIRP-205ENST00000556310 HIST1H1AQ02539 215 aaPredicted RBP8.32□□□□□ -1.08
SLIRP-205ENST00000556310 FCN2Q15485 313 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 GCSAMLQ5JQS6 135 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 RPUSD4Q96CM3 377 aaKnown RBP8.32□□□□□ -1.08
SLIRP-205ENST00000556310 SAT2Q96F10 170 aaPredicted RBP8.32□□□□□ -1.08
SLIRP-205ENST00000556310 TMEM14CQ9P0S9 112 aa8.32□□□□□ -1.08
SLIRP-205ENST00000556310 KLK5Q9Y337 293 aaPredicted RBP8.32□□□□□ -1.08
SLIRP-205ENST00000556310 GOLT1BQ9Y3E0 138 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms