RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 NBPF19A0A087WUL8 3843 aa4.86□□□□□ -1.63
HIF1A-208ENST00000556237 HECTD1Q9ULT8 2610 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 GCN1Q92616 2671 aaKnown RBP4.85□□□□□ -1.63
HIF1A-208ENST00000556237 IGHV3-49A0A0A0MS15 119 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 IGHV3-66A0A0C4DH42 116 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 PGPA6NDG6 321 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 FAM74A7A6NL05 159 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 H3BTX0 84 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 NDUFA4O00483 81 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 NDUFA7O95182 113 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 APOC3P02656 99 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 LGALS1P09382 135 aaKnown RBP4.85□□□□□ -1.63
HIF1A-208ENST00000556237 ZP3P21754 424 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 CDX1P47902 265 aaPredicted RBP4.85□□□□□ -1.63
HIF1A-208ENST00000556237 ATP5G3P48201 142 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 CD81P60033 236 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 RANP62826 216 aaKnown RBP4.85□□□□□ -1.63
HIF1A-208ENST00000556237 MEF2BQ02080 365 aaPredicted RBP4.85□□□□□ -1.63
HIF1A-208ENST00000556237 FOXI1Q12951 378 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 KHDC1LQ5JSQ8 128 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 BPIFA4PQ86YQ2 179 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 GPHB5Q86YW7 130 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 RNF152Q8N8N0 203 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 OR4F17Q8NGA8 305 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 DPF1Q92782 380 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 FXYD5Q96DB9 178 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 TXNDC17Q9BRA2 123 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 SEC11CQ9BY50 192 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 ZNF586Q9NXT0 402 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 CREBBPQ92793 2442 aa4.85□□□□□ -1.63
HIF1A-208ENST00000556237 TACC2O95359 2948 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 UNC79Q9P2D8 2635 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 ACANP16112 2415 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 IGHV3OR16-13A0A075B7E8 117 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 IGHV3-74A0A0B4J1X5 117 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 A0A1W2PRE2 83 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 CLPSL1A2RUU4 121 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 ZNF727A8MUV8 499 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 F6UZH7 168 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 H3BQ15 152 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 PDE6DO43924 150 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 NDUFS6O75380 124 aaKnown RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 NDUFB4O95168 129 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 APOHP02749 345 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 CD28P10747 220 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 RPL7P18124 248 aaKnown RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 CRYBB3P26998 211 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 ZNF674Q2M3X9 581 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 RPEL1Q2QD12 228 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 CD300EQ496F6 205 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 TCTEX1D4Q5JR98 221 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 C10orf91Q5T1B1 145 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 UNQ9165/PRO28630Q6UXU0 137 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 C18orf65Q6ZTR6 163 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 OR1N2Q8NGR9 330 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 MYOZ3Q8TDC0 251 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 RPUSD4Q96CM3 377 aaKnown RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 NKX6-2Q9C056 277 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-208ENST00000556237 ITPR3Q14573 2671 aa4.84□□□□□ -1.63
HIF1A-208ENST00000556237 MYO9AB2RTY4 2548 aa4.84□□□□□ -1.64
HIF1A-208ENST00000556237 HIVEP2P31629 2446 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 IGHV4OR15-8A0A075B7B6 117 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 A0A087WW49 117 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 A0A1W2PS18 150 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 TMEM250H0YL14 139 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 K7EMT4 169 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 MRPS12O15235 138 aaKnown RBP4.83□□□□□ -1.64
HIF1A-208ENST00000556237 BUB3O43684 328 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 SLC25A5P05141 298 aaKnown RBP4.83□□□□□ -1.64
HIF1A-208ENST00000556237 GP9P14770 177 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 ADCYAP1P18509 176 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 GALR1P47211 349 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 GUCA2BQ16661 112 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 TMEM241Q24JQ0 296 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 C1orf194Q5T5A4 169 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 HIST2H2BDQ6DRA6 164 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 C16orf54Q6UWD8 224 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 CCDC28AQ8IWP9 274 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 NTN5Q8WTR8 489 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-208ENST00000556237 TMEM190Q8WZ59 177 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 Q9H3A6 140 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 SMPXQ9UHP9 88 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 CARHSP1Q9Y2V2 147 aaKnown RBP4.83□□□□□ -1.64
HIF1A-208ENST00000556237 UFC1Q9Y3C8 167 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 SMAD5-AS1Q9Y6J3 95 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 ARL2-SNX15V9GYD0 113 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 TEX15Q9BXT5 2789 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 NOTCH2Q04721 2471 aa4.83□□□□□ -1.64
HIF1A-208ENST00000556237 SONP18583 2426 aaKnown RBP4.83□□□□□ -1.64
HIF1A-208ENST00000556237 ITPR2Q14571 2701 aa4.82□□□□□ -1.64
HIF1A-208ENST00000556237 TRBV19A0A075B6N1 114 aa4.82□□□□□ -1.64
HIF1A-208ENST00000556237 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
HIF1A-208ENST00000556237 HELTA6NFD8 242 aa4.82□□□□□ -1.64
HIF1A-208ENST00000556237 GGTLC3B5MD39 225 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms