RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 FAM208BQ5VWN6 2430 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 COL12A1Q99715 3063 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 FBLL1A6NHQ2 334 aaKnown RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 SH2D7A6NKC9 451 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 LTAP01374 205 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 GPR183P32249 361 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 IER3P46695 156 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 UBE2G1P62253 170 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 SNRPEP62304 92 aaKnown RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 PSG9Q00887 426 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 CFHR3Q02985 330 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 OR5I1Q13606 314 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 COX19Q49B96 90 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 ACTL10Q5JWF8 245 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 CYB5R2Q6BCY4 276 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 TEX29Q8N6K0 151 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 CMTM2Q8TAZ6 248 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 LINC00479Q96M42 142 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 SAV1Q9H4B6 383 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF492Q9P255 531 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 TACC2O95359 2948 aa6.41□□□□□ -1.38
ATXN3-235ENST00000556082 A0A087X0K7 114 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
ATXN3-235ENST00000556082 A0A0G2JLM5 398 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF320A2RRD8 509 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 CLPSL1A2RUU4 121 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 K7EQM0 130 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 BUB3O43684 328 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 IGLV2-11P01706 119 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 IGHV3-23P01764 117 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 TRGV3P03979 118 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 MEOX2P50222 304 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 RPL15P61313 204 aaKnown RBP6.4□□□□□ -1.38
ATXN3-235ENST00000556082 BLCAPP62952 87 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 GNG5P63218 68 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 LY6EQ16553 131 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 RPEL1Q2QD12 228 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 DEFB112Q30KQ8 113 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 CT83Q5H943 113 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
ATXN3-235ENST00000556082 IBA57Q5T440 356 aaKnown RBP6.4□□□□□ -1.38
ATXN3-235ENST00000556082 CLEC19AQ6UXS0 136 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 Q6YL49 198 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 BCL6BQ8N143 479 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-235ENST00000556082 TMEM75Q8N9X5 138 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 FRZBQ92765 325 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 GRAMD2BQ96HH9 432 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 MS4A10Q96PG2 267 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 PRSS22Q9GZN4 317 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 ZFP30Q9Y2G7 519 aa6.4□□□□□ -1.38
ATXN3-235ENST00000556082 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 SLC17A3O00476 420 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 TRGC1P0CF51 173 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 MGST1P10620 155 aaKnown RBP6.39□□□□□ -1.39
ATXN3-235ENST00000556082 HNF1AP20823 631 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
ATXN3-235ENST00000556082 FABP9Q0Z7S8 132 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 RASL11AQ6T310 242 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 COX8CQ7Z4L0 72 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 OR8I2Q8N0Y5 310 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 Q8N1Y9 231 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 EXOC3-AS1Q8N2X6 119 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 Q96MF0 132 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 RNASE7Q9H1E1 156 aaKnown RBP6.39□□□□□ -1.39
ATXN3-235ENST00000556082 AAMDCQ9H7C9 122 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 SMAD5-AS1Q9Y6J3 95 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 X6R8D5 127 aa6.39□□□□□ -1.39
ATXN3-235ENST00000556082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.38□□□□□ -1.394e-12■■■□□ 18.3
ATXN3-235ENST00000556082 USP9YO00507 2555 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-235ENST00000556082 C19orf71A6NCJ1 209 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 ZNF705GA8MUZ8 300 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-235ENST00000556082 DIRC3C9JPN6 131 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 H3BTX0 84 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 NDUFA4O00483 81 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 GATCO43716 136 aaKnown RBP6.38□□□□□ -1.39
ATXN3-235ENST00000556082 IGHV4-59P01825 116 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 IGHG4P01861 327 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 S100A8P05109 93 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 SNRPCP09234 159 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms