RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TFPI2P48307 235 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 ALKAL2Q6UX46 152 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 SSX7Q7RTT5 188 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 SUN5Q8TC36 379 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 FXYD5Q96DB9 178 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 SAT2Q96F10 170 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF586Q9NXT0 402 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 ISLRO14498 428 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 SOCS3O14543 225 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF253O75346 499 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
SYNE2-215ENST00000554997 OR10J4P0C629 311 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 ID1P41134 155 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 PDE6HQ13956 83 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 LCN15Q6UWW0 184 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF680Q8NEM1 530 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 FAM213BQ8TBF2 198 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 LRRC20Q8TCA0 184 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 SFT2D1Q8WV19 159 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 C16orf92Q96LL3 132 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 FAM110AQ9BQ89 295 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 CLEC5AQ9NY25 188 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 CMYA5Q8N3K9 4069 aa7.62□□□□□ -1.19
SYNE2-215ENST00000554997 TRAV1-1A0A0B4J248 108 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 NDUFB4O95168 129 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 IFNA7P01567 189 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
SYNE2-215ENST00000554997 ARL14EPLP0DKL9 152 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 GCHFRP30047 84 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 SNRPD3P62318 126 aaKnown RBP7.61□□□□□ -1.19
SYNE2-215ENST00000554997 BLOC1S1P78537 153 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 PSG9Q00887 426 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 FAM74A1Q5RGS3 127 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 Q8N1Y9 231 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 LYPD1Q8N2G4 141 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF331Q9NQX6 463 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-215ENST00000554997 TMEM167BQ9NRX6 74 aa7.61□□□□□ -1.19
SYNE2-215ENST00000554997 TRAV8-2A0A0B4J237 113 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 MAP1LC3B2A6NCE7 125 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF705EA8MWA4 302 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-215ENST00000554997 H3BTX0 84 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 CD7P09564 240 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 PSMB3P49720 205 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 FGF8P55075 233 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-215ENST00000554997 UBE2L3P68036 154 aaKnown RBP7.6□□□□□ -1.19
SYNE2-215ENST00000554997 GTSCR1Q86UQ5 136 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 FAM24BQ8N5W8 94 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 BLNKQ8WV28 456 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 MAP1LC3BQ9GZQ8 125 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 TMPRSS5Q9H3S3 457 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
SYNE2-215ENST00000554997 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 HBE1P02100 147 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 CD81P60033 236 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 RANP62826 216 aaKnown RBP7.59□□□□□ -1.19
SYNE2-215ENST00000554997 PSG3Q16557 428 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 LINC00052Q96N35 136 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 UBQLN2Q9UHD9 624 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 NOTCH3Q9UM47 2321 aa7.59□□□□□ -1.19
SYNE2-215ENST00000554997 A0A1W2PRE2 83 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 OR11H12B2RN74 326 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 SLC17A3O00476 420 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 ZNF688P0C7X2 276 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PPT1P50897 306 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 DEFB131AP59861 70 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 CCL20P78556 96 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PMS2P11Q13670 270 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 ODF3L2Q3SX64 289 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PSMG4Q5JS54 123 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 IGFL4Q6B9Z1 124 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 LYPD6BQ8NI32 183 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 C20orf173Q96LM9 149 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PRR25Q96S07 402 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 AAMDCQ9H7C9 122 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 MAP6D1Q9H9H5 199 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PRELID1Q9Y255 219 aa7.58□□□□□ -1.2
SYNE2-215ENST00000554997 PGPA6NDG6 321 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 IFITM2Q01629 132 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 ICAM4Q14773 271 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 APRG1Q8IVJ8 170 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 IQCF2Q8IXL9 164 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 RNF182Q8N6D2 247 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 ARL6IP6Q8N6S5 226 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 RXFP4Q8TDU9 374 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 MRPL53Q96EL3 112 aaKnown RBP7.57□□□□□ -1.2
SYNE2-215ENST00000554997 NKX6-2Q9C056 277 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-215ENST00000554997 Q9H3A6 140 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 OTORQ9NRC9 128 aa7.57□□□□□ -1.2
SYNE2-215ENST00000554997 ZNF705FA8MVS1 300 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-215ENST00000554997 A8MZ25 164 aa7.56□□□□□ -1.2
SYNE2-215ENST00000554997 HLA-DMBP28068 263 aa7.56□□□□□ -1.2
SYNE2-215ENST00000554997 SUMO1P63165 101 aaKnown RBP7.56□□□□□ -1.2
SYNE2-215ENST00000554997 ZNF767PQ75MW2 155 aa7.56□□□□□ -1.2
SYNE2-215ENST00000554997 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
SYNE2-215ENST00000554997 RPUSD4Q96CM3 377 aaKnown RBP7.56□□□□□ -1.2
SYNE2-215ENST00000554997 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms