RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SLC50A1Q9BRV3 221 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 H3BQ15 152 aa12.28□□□□□ -0.44
SPTLC2-203ENST00000554901 CXorf1O96002 111 aa12.28□□□□□ -0.44
SPTLC2-203ENST00000554901 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
SPTLC2-203ENST00000554901 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
SPTLC2-203ENST00000554901 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
SPTLC2-203ENST00000554901 TRBV19A0A075B6N1 114 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 NBEAP1P0C6P0 100 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 PYYP10082 97 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 CD81P60033 236 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 LRRC20Q8TCA0 184 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 MBD3L1Q8WWY6 194 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 FXYD5Q96DB9 178 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 SAT2Q96F10 170 aaPredicted RBP12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 C16orf92Q96LL3 132 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 ZNF586Q9NXT0 402 aa12.27□□□□□ -0.44
SPTLC2-203ENST00000554901 ARL14EPLP0DKL9 152 aa12.27□□□□□ -0.45
SPTLC2-203ENST00000554901 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.45
SPTLC2-203ENST00000554901 PRR25Q96S07 402 aa12.27□□□□□ -0.45
SPTLC2-203ENST00000554901 ZNF331Q9NQX6 463 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-203ENST00000554901 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
SPTLC2-203ENST00000554901 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 OR11H12B2RN74 326 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 CD7P09564 240 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 FHITP49789 147 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 PSG9Q00887 426 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 Q8N1Y9 231 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 LYPD1Q8N2G4 141 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
SPTLC2-203ENST00000554901 HMGB3O15347 200 aaKnown RBP12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 OR10J4P0C629 311 aa12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 GCHFRP30047 84 aa12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 ALKAL2Q6UX46 152 aa12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
SPTLC2-203ENST00000554901 TEX46H3BTG2 121 aa12.24□□□□□ -0.45
SPTLC2-203ENST00000554901 H2AFB1P0C5Y9 115 aa12.24□□□□□ -0.45
SPTLC2-203ENST00000554901 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
SPTLC2-203ENST00000554901 FAM24BQ8N5W8 94 aa12.24□□□□□ -0.45
SPTLC2-203ENST00000554901 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-203ENST00000554901 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 NDUFB4O95168 129 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 DEFB131AP59861 70 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 TEX261Q6UWH6 196 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 SFT2D1Q8WV19 159 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 BLNKQ8WV28 456 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 MRPL53Q96EL3 112 aaKnown RBP12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 AAMDCQ9H7C9 122 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 PRELID1Q9Y255 219 aa12.23□□□□□ -0.45
SPTLC2-203ENST00000554901 SLC17A3O00476 420 aa12.22□□□□□ -0.45
SPTLC2-203ENST00000554901 IFNA7P01567 189 aa12.22□□□□□ -0.45
SPTLC2-203ENST00000554901 HBE1P02100 147 aa12.22□□□□□ -0.45
SPTLC2-203ENST00000554901 FAM74A1Q5RGS3 127 aa12.22□□□□□ -0.45
SPTLC2-203ENST00000554901 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 A8MZ25 164 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 H3BTX0 84 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 BLOC1S1P78537 153 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 PSG3Q16557 428 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 LINC00052Q96N35 136 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 ARL2-SNX15V9GYD0 113 aa12.21□□□□□ -0.45
SPTLC2-203ENST00000554901 PPT1P50897 306 aa12.21□□□□□ -0.46
SPTLC2-203ENST00000554901 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.46
SPTLC2-203ENST00000554901 ZNF680Q8NEM1 530 aa12.21□□□□□ -0.46
SPTLC2-203ENST00000554901 UBQLN2Q9UHD9 624 aa12.21□□□□□ -0.46
SPTLC2-203ENST00000554901 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 RANP62826 216 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 IQCF2Q8IXL9 164 aa12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
SPTLC2-203ENST00000554901 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
SPTLC2-203ENST00000554901 DEFB125Q8N687 156 aa12.19□□□□□ -0.46
SPTLC2-203ENST00000554901 RNF182Q8N6D2 247 aa12.19□□□□□ -0.46
SPTLC2-203ENST00000554901 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
SPTLC2-203ENST00000554901 Q9H3A6 140 aa12.19□□□□□ -0.46
SPTLC2-203ENST00000554901 K7EIL1 84 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 PMS2P11Q13670 270 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 ICAM4Q14773 271 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 APRG1Q8IVJ8 170 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 DNAH3Q8TD57 4116 aa12.18□□□□□ -0.46
SPTLC2-203ENST00000554901 IGHV4-30-4P0DP06 118 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 EXOC3-AS1Q8N2X6 119 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 CLUHP3Q96NS8 147 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 TMPRSS5Q9H3S3 457 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms