RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MMDQ15546 238 aa8.8□□□□□ -1
SRP54-205ENST00000554803 Q6AWC8 147 aa8.8□□□□□ -1
SRP54-205ENST00000554803 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
SRP54-205ENST00000554803 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
SRP54-205ENST00000554803 C18orf32Q8TCD1 76 aa8.8□□□□□ -1
SRP54-205ENST00000554803 LEAP2Q969E1 77 aa8.8□□□□□ -1
SRP54-205ENST00000554803 FXYD5Q96DB9 178 aa8.8□□□□□ -1
SRP54-205ENST00000554803 DUX5Q96PT3 197 aa8.8□□□□□ -1
SRP54-205ENST00000554803 PAM16Q9Y3D7 125 aa8.8□□□□□ -1
SRP54-205ENST00000554803 GOLT1BQ9Y3E0 138 aa8.8□□□□□ -1
SRP54-205ENST00000554803 CRXO43186 299 aaPredicted RBP8.79□□□□□ -1
SRP54-205ENST00000554803 HYPMO75409 117 aa8.79□□□□□ -1
SRP54-205ENST00000554803 IGLC2P0DOY2 106 aa8.79□□□□□ -1
SRP54-205ENST00000554803 IGLC3P0DOY3 106 aa8.79□□□□□ -1
SRP54-205ENST00000554803 ZNF25P17030 456 aaPredicted RBP8.79□□□□□ -1
SRP54-205ENST00000554803 BTF3P20290 206 aaKnown RBP8.79□□□□□ -1
SRP54-205ENST00000554803 HNRNPA3P51991 378 aaKnown RBP8.79□□□□□ -1
SRP54-205ENST00000554803 MFAP2P55001 183 aa8.79□□□□□ -1
SRP54-205ENST00000554803 SPATA45Q537H7 98 aa8.79□□□□□ -1
SRP54-205ENST00000554803 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
SRP54-205ENST00000554803 Q8N976 141 aa8.79□□□□□ -1
SRP54-205ENST00000554803 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
SRP54-205ENST00000554803 ORAOV1Q8WV07 137 aa8.79□□□□□ -1
SRP54-205ENST00000554803 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
SRP54-205ENST00000554803 NUDT11Q96G61 164 aa8.79□□□□□ -1
SRP54-205ENST00000554803 MLST8Q9BVC4 326 aa8.79□□□□□ -1
SRP54-205ENST00000554803 PRSS22Q9GZN4 317 aa8.79□□□□□ -1
SRP54-205ENST00000554803 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
SRP54-205ENST00000554803 OTORQ9NRC9 128 aa8.79□□□□□ -1
SRP54-205ENST00000554803 TRAV9-2A0A087WT02 112 aa8.78□□□□□ -1
SRP54-205ENST00000554803 A0A1B0GUS0 222 aa8.78□□□□□ -1
SRP54-205ENST00000554803 SERTM2A0A1B0GWG4 89 aa8.78□□□□□ -1
SRP54-205ENST00000554803 C3orf79P0CE67 100 aa8.78□□□□□ -1
SRP54-205ENST00000554803 S100A7P31151 101 aa8.78□□□□□ -1
SRP54-205ENST00000554803 TMEM155Q4W5P6 130 aa8.78□□□□□ -1
SRP54-205ENST00000554803 TMEM200BQ69YZ2 307 aa8.78□□□□□ -1
SRP54-205ENST00000554803 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
SRP54-205ENST00000554803 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
SRP54-205ENST00000554803 NIT1Q86X76 327 aa8.78□□□□□ -1
SRP54-205ENST00000554803 NUP35Q8NFH5 326 aa8.78□□□□□ -1
SRP54-205ENST00000554803 OR8B3Q8NGG8 313 aa8.78□□□□□ -1
SRP54-205ENST00000554803 C8orf46Q8TAG6 207 aa8.78□□□□□ -1
SRP54-205ENST00000554803 NPIPB3Q92617 1050 aa8.78□□□□□ -1
SRP54-205ENST00000554803 OR8B2Q96RD0 313 aa8.78□□□□□ -1
SRP54-205ENST00000554803 TXN2Q99757 166 aa8.78□□□□□ -1
SRP54-205ENST00000554803 CITED1Q99966 193 aa8.78□□□□□ -1
SRP54-205ENST00000554803 ALKBH7Q9BT30 221 aaPredicted RBP8.78□□□□□ -1
SRP54-205ENST00000554803 NDFIP1Q9BT67 221 aa8.78□□□□□ -1
SRP54-205ENST00000554803 TMEM208Q9BTX3 173 aa8.78□□□□□ -1
SRP54-205ENST00000554803 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
SRP54-205ENST00000554803 ST20Q9HBF5 79 aa8.78□□□□□ -1
SRP54-205ENST00000554803 TNFRSF19Q9NS68 423 aa8.78□□□□□ -1
SRP54-205ENST00000554803 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
SRP54-205ENST00000554803 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 PPIAL4CA0A0B4J2A2 164 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 NPIPB6E9PJ23 425 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 K7EQM0 130 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 TIMM23O14925 209 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 LTAP01374 205 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 IGLV2-23P01705 113 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 SLC25A5P05141 298 aaKnown RBP8.77□□□□□ -1.01
SRP54-205ENST00000554803 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 RPL27AP46776 148 aaKnown RBP8.77□□□□□ -1.01
SRP54-205ENST00000554803 FOXA3P55318 350 aaPredicted RBP8.77□□□□□ -1.01
SRP54-205ENST00000554803 WT1-ASQ06250 92 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 FXYD3Q14802 87 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 PET117Q6UWS5 81 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 RBPMS2Q6ZRY4 209 aaKnown RBP8.77□□□□□ -1.01
SRP54-205ENST00000554803 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
SRP54-205ENST00000554803 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
SRP54-205ENST00000554803 DYNC2H1Q8NCM8 4307 aaKnown RBP8.76□□□□□ -1.01
SRP54-205ENST00000554803 C19orf71A6NCJ1 209 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 M0R2Z0 102 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 P01737 135 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 IGHV3-7P01780 117 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 DLX6P56179 175 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 PSMG4Q5JS54 123 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 PATE2Q6UY27 113 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 ZNF841Q6ZN19 808 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 Q6ZN92 141 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 OR2T6Q8NHC8 308 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 TMEM70Q9BUB7 260 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 TMEM133Q9H2Q1 129 aa8.76□□□□□ -1.01
SRP54-205ENST00000554803 FNDC4Q9H6D8 234 aaPredicted RBP8.76□□□□□ -1.01
SRP54-205ENST00000554803 IGHV2-26A0A0B4J1V2 119 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 IGLC7A0M8Q6 106 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 SCGB2A1O75556 95 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 TCRAP04437 139 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 LIPFP07098 398 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 CRYGBP07316 175 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 GP9P14770 177 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 GATA2P23769 480 aaPredicted RBP8.75□□□□□ -1.01
SRP54-205ENST00000554803 TCL1AP56279 114 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 RPS20P60866 119 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms