RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CA1P00915 261 aaPredicted RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 IFNA4P05014 189 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 RD3LP0DJH9 198 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 ANXA7P20073 488 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 EIF2B2P49770 351 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 PAFAH1B2P68402 229 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 RPL24P83731 157 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 ZNF90Q03938 601 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 DHRS2Q13268 280 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 GAMTQ14353 236 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 OR8G2PQ6IF36 304 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 ACOT7LQ6ZUV0 252 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 STPG4Q8N801 248 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 OR51G1Q8NGK1 321 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 OR4D5Q8NGN0 318 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 Q8WTZ3 238 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 GATAD1Q8WUU5 269 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 NARS2Q96I59 477 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 TRGV9Q99603 122 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 C7orf50Q9BRJ6 194 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 MAGT1Q9H0U3 335 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 C11orf68Q9H3H3 251 aaKnown RBP3□□□□□ -1.93
VTI1B-203ENST00000554636 RABAC1Q9UI14 185 aa3□□□□□ -1.93
VTI1B-203ENST00000554636 IGLV5-45A0A087WSX0 123 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 LINC00854A0A1B0GVQ3 168 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 NUPR2A6NF83 97 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 ZNF705EA8MWA4 302 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 H3BP45 60 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 WRBO00258 174 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 PLA2G10O15496 165 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 SYNGR2O43760 224 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 CCNKO75909 580 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 OR4E1P0C645 316 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 SPP1P10451 314 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 NUP62P37198 522 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 INPP1P49441 399 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 PAX9P55771 341 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 DEFB1P60022 68 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 LYZP61626 148 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 POLR2GP62487 172 aaKnown RBP eCLIP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 RAB11AP62491 216 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 OR2F1Q13607 317 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 PSMG4Q5JS54 123 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 ACTL10Q5JWF8 245 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 MORN3Q6PF18 240 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 CEMP1Q6PRD7 247 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 SIGLEC15Q6ZMC9 328 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 TMEM182Q6ZP80 229 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 STHQ8IWL8 128 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 Q8NAQ8 132 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 OR11H2Q8NH07 326 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 COQ8AQ8NI60 647 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 MITD1Q8WV92 249 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 C17orf77Q96MU5 243 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 CIB3Q96Q77 187 aaPredicted RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 LITAFQ99732 161 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 PBDC1Q9BVG4 233 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 GFRA4Q9GZZ7 299 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 C20orf85Q9H1P6 137 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 NRN1Q9NPD7 142 aa2.99□□□□□ -1.93
VTI1B-203ENST00000554636 RCL1Q9Y2P8 373 aaKnown RBP2.99□□□□□ -1.93
VTI1B-203ENST00000554636 H3BMM0 161 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 H3BRN7 92 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 DEFB4AO15263 64 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 LYRM1O43325 122 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 SSSCA1O60232 199 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 FABP1P07148 127 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RBMY1A1P0DJD3 496 aaKnown RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RBMY1CP0DJD4 496 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 HLA-DRB4P13762 266 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 GATA2P23769 480 aaPredicted RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 NKX2-1P43699 371 aaPredicted RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 AP2S1P53680 142 aaPredicted RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RBMY1FQ15415 496 aaKnown RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 CNPY1Q3B7I2 92 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 TMEM41BQ5BJD5 291 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 SPANXN5Q5MJ07 72 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 C1orf194Q5T5A4 169 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 GDF5OSQ5U4N7 250 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 TMEM14EPQ6UXP3 125 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 TMEM144Q7Z5S9 345 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 THAP6Q8TBB0 222 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 PHLDA1Q8WV24 401 aaPredicted RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RAB40CQ96S21 281 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RARRES2Q99969 163 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 CCDC32Q9BV29 185 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 SAV1Q9H4B6 383 aaPredicted RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 C11orf1Q9H5F2 150 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 CLEC5AQ9NY25 188 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 PTTG2Q9NZH5 202 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 NDUFA13Q9P0J0 144 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 TBC1D24Q9ULP9 559 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 PAIP2BQ9ULR5 123 aaKnown RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 STRAPQ9Y3F4 350 aaKnown RBP2.98□□□□□ -1.93
VTI1B-203ENST00000554636 HLA-DRB4X5D2U9 266 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 RYR1P21817 5038 aa2.98□□□□□ -1.93
VTI1B-203ENST00000554636 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms