RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 GGTLC3B5MD39 225 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 M0R2Z0 102 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 PEX7O00628 323 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 WNT9BO14905 357 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 PLAUP00749 431 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 LHBP01229 141 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV4-39P01824 125 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 CECR9P0C854 216 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 SAA2P0DJI9 122 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV3-43DP0DP04 118 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 MGST1P10620 155 aaKnown RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 SRD5A1P18405 259 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 MC5RP33032 325 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 CDKN1BP46527 198 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 CEBPDP49716 269 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 DSCR9P59020 149 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 COTL1Q14019 142 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 MMDQ15546 238 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 BATFQ16520 125 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 SPINK9Q5DT21 86 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A48Q6ZT89 311 aaKnown RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 SMIM15Q7Z3B0 74 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 NIT1Q86X76 327 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 MUC15Q8N387 334 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 UBALD1Q8TB05 177 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 TMEM167AQ8TBQ9 72 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 TMEM186Q96B77 213 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 GPR82Q96P67 336 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 FAM103A1Q9BTL3 118 aaKnown RBP4.71□□□□□ -1.66
VPS33B-203ENST00000554264 PAXXQ9BUH6 204 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 NGBQ9NPG2 151 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 RNF7Q9UBF6 113 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 LINC00312Q9Y6C7 94 aa4.71□□□□□ -1.66
VPS33B-203ENST00000554264 DSCAML1Q8TD84 2053 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 IGLV3-9A0A075B6K5 115 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV2-70DA0A0C4DH43 119 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 A0A1B0GXF2 115 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 IGLC7A0M8Q6 106 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 PSMB11A5LHX3 300 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 LYZL6O75951 148 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RNASE2P10153 161 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A16P16260 332 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 S100A7P31151 101 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 MFAP2P55001 183 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 PLP1P60201 277 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RPL8P62917 257 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 LOXL1Q08397 574 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 C17orf58Q2M2W7 97 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF672Q499Z4 452 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RPL39P5Q59GN2 51 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 CT45A1Q5HYN5 189 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 TIMM23BQ5SRD1 257 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 Q6ZR03 302 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF826PQ6ZT77 177 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF833PQ6ZTB9 187 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 BHLHA15Q7RTS1 189 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 SPATA12Q7Z6I5 190 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 LYG1Q8N1E2 194 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 LINC00311Q8N616 119 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 OR4C13Q8NGP0 309 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 CT45A3Q8NHU0 189 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RFESDQ8TAC1 157 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 SRSF8Q9BRL6 282 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 NDFIP1Q9BT67 221 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 MAP1LC3CQ9BXW4 147 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RNASE7Q9H1E1 156 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RPP21Q9H633 154 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 NDUFA4L2Q9NRX3 87 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 TET2Q6N021 2002 aaPredicted RBP4.7□□□□□ -1.66
VPS33B-203ENST00000554264 ABCA1O95477 2261 aa4.7□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV4-30-2A0A087WSY4 118 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV1-18A0A0C4DH31 117 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 TEX50A0A1B0GTY4 177 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 A0A1B0GUS0 222 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 K7EQM0 130 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 TCF21O43680 179 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 ACTL6BO94805 426 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 P01737 135 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 PPBPP02775 128 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 CT45A6P0DMU7 189 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 CT45A5P0DMU8 189 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 CT45A7P0DMV0 189 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 DEFA4P12838 97 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 NTF3P20783 257 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 HNF1AP20823 631 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 MYCNOSP40205 109 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 LGALS7P47929 136 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 PCP4P48539 62 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 FABP6P51161 128 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SEC11AP67812 179 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 RHOGP84095 191 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 HIST1H1AQ02539 215 aaPredicted RBP4.69□□□□□ -1.66
VPS33B-203ENST00000554264 ALKBH6Q3KRA9 238 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 VMA21Q3ZAQ7 101 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms