RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 DYNLRB2Q8TF09 96 aa7.97□□□□□ -1.13
TMEM55B-205ENST00000554028 FXYD5Q96DB9 178 aa7.97□□□□□ -1.13
TMEM55B-205ENST00000554028 ZNF503Q96F45 646 aa7.97□□□□□ -1.13
TMEM55B-205ENST00000554028 ZNF747Q9BV97 191 aa7.97□□□□□ -1.13
TMEM55B-205ENST00000554028 AAMDCQ9H7C9 122 aa7.97□□□□□ -1.13
TMEM55B-205ENST00000554028 TRBV19A0A075B6N1 114 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 ADARB2-AS1A8MUL3 147 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 C11orf94C9JXX5 98 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 F6UZH7 168 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 PDE6DO43924 150 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 RANP62826 216 aaKnown RBP7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 MEF2BQ02080 365 aaPredicted RBP7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 PDE6HQ13956 83 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 ZNF506Q5JVG8 444 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 TCF24Q7RTU0 167 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 EIF4E3Q8N5X7 224 aaKnown RBP7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 CMTM2Q8TAZ6 248 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 RXFP4Q8TDU9 374 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 GLMPQ8WWB7 406 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 CLEC5AQ9NY25 188 aa7.96□□□□□ -1.14
TMEM55B-205ENST00000554028 NIPBLQ6KC79 2804 aaeCLIP7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 A0A087X0K7 114 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 PGPA6NDG6 321 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 H3BQ15 152 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 MRPS12O15235 138 aaKnown RBP7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 ZNF253O75346 499 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 SNRPCP09234 159 aaKnown RBP7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 IGLC2P0DOY2 106 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 CSN1S1P47710 185 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 SUMO1P63165 101 aaKnown RBP7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 RBPMS2Q6ZRY4 209 aaKnown RBP7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 RARRES2Q99969 163 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 TCEAL7Q9BRU2 100 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 SLC50A1Q9BRV3 221 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 OTORQ9NRC9 128 aa7.95□□□□□ -1.14
TMEM55B-205ENST00000554028 DNASE2O00115 360 aaPredicted RBP7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 NDUFS6O75380 124 aaKnown RBP7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 CSN3P07498 182 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 ID1P41134 155 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 ICAM4Q14773 271 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 C16orf92Q96LL3 132 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 SLC35B3Q9H1N7 401 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 Q9H3A6 140 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 SIGLEC8Q9NYZ4 499 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 PRELID1Q9Y255 219 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 SMAD5-AS1Q9Y6J3 95 aa7.94□□□□□ -1.14
TMEM55B-205ENST00000554028 JMJD1CQ15652 2540 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 IGKV3-7A0A075B6H7 116 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 TMEM250H0YL14 139 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 H3BTX0 84 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 K7EQM0 130 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 SAP30O75446 220 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 ATP5G3P48201 142 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 CEBPGP53567 150 aa7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 RPUSD4Q96CM3 377 aaKnown RBP7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 YTHDF2Q9Y5A9 579 aaKnown RBP7.93□□□□□ -1.14
TMEM55B-205ENST00000554028 TRAV25A0A0B4J276 109 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 ARL6IP6Q8N6S5 226 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 C5orf17Q8NAS9 161 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 HIST1H2BAQ96A08 127 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 C17orf77Q96MU5 243 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 MCRIP2Q9BUT9 160 aaKnown RBP7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 ZNF331Q9NQX6 463 aaPredicted RBP7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 MLXQ9UH92 298 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 FBN3Q75N90 2809 aa7.92□□□□□ -1.14
TMEM55B-205ENST00000554028 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 GGTLC3B5MD39 225 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 KRBOX1C9JBD0 128 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 ISLRO14498 428 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 NDUFB4O95168 129 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 SRP19P09132 144 aaKnown RBP7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 CD33P20138 364 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 EDN2P20800 178 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 INSL3P51460 131 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 CD81P60033 236 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 SNRPD3P62318 126 aaKnown RBP7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 DEFB114Q30KQ6 69 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 FAM90A2PQ658T7 463 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 GBGT1Q8N5D6 347 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 OR2K2Q8NGT1 345 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 EPDR1Q9UM22 224 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
TMEM55B-205ENST00000554028 TRAV2A0A0B4J234 112 aa7.9□□□□□ -1.14
TMEM55B-205ENST00000554028 SERTM2A0A1B0GWG4 89 aa7.9□□□□□ -1.14
TMEM55B-205ENST00000554028 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
TMEM55B-205ENST00000554028 F8W036 122 aa7.9□□□□□ -1.14
TMEM55B-205ENST00000554028 SLC17A3O00476 420 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms