RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ISLRO14498 428 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 SPRY2O43597 315 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 MPC2O95563 127 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 CA1P00915 261 aaPredicted RBP6.16□□□□□ -1.42
PSEN1-209ENST00000553855 SPP1P10451 314 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 FGF7P21781 194 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 H2BFSP57053 126 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 TIRAPP58753 221 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 B2MP61769 119 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
PSEN1-209ENST00000553855 CLINT1Q14677 625 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 C10orf113Q5VZT2 155 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 BPIFA4PQ86YQ2 179 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 SYT8Q8NBV8 401 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 OR5C1Q8NGR4 320 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 SCGB1C1Q8TD33 95 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 GATAD1Q8WUU5 269 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 ASB13Q8WXK3 278 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 SHANK2-AS3Q9BTD1 123 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 OR5AC2Q9NZP5 309 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 WDR83OSQ9Y284 106 aa6.16□□□□□ -1.42
PSEN1-209ENST00000553855 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.42
PSEN1-209ENST00000553855 RPL29P47914 159 aaKnown RBP6.15□□□□□ -1.42
PSEN1-209ENST00000553855 VWC2Q2TAL6 325 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 SPATA31B1PQ5VZV4 182 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 TMEM182Q6ZP80 229 aaPredicted RBP6.15□□□□□ -1.42
PSEN1-209ENST00000553855 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 FAM24BQ8N5W8 94 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 MGST2Q99735 147 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 SCRT1Q9BWW7 348 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 C11orf1Q9H5F2 150 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 RETNQ9HD89 108 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 DNAJC4Q9NNZ3 241 aa6.15□□□□□ -1.42
PSEN1-209ENST00000553855 DUSP14O95147 198 aaKnown RBP6.14□□□□□ -1.43
PSEN1-209ENST00000553855 LYL1P12980 280 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 MIC13Q5XKP0 118 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 FOXI2Q6ZQN5 318 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 Q6ZSN1 163 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 MUC7Q8TAX7 377 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 RNF183Q96D59 192 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 ATP5SQ99766 215 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 RARRES2Q99969 163 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 SLC39A9Q9NUM3 307 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 PPP1R14DQ9NXH3 145 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 HSPB11Q9Y547 144 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
PSEN1-209ENST00000553855 H0YIZ8 118 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
PSEN1-209ENST00000553855 HLA-DRB4P13762 266 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 CXCL2P19875 107 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 OPCMLQ14982 345 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 FCN2Q15485 313 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 TRPT1Q86TN4 253 aaKnown RBP6.13□□□□□ -1.43
PSEN1-209ENST00000553855 INO80EQ8NBZ0 244 aaPredicted RBP6.13□□□□□ -1.43
PSEN1-209ENST00000553855 ZNF738Q8NE65 137 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 NPCDR1Q9BY65 106 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 CLEC5AQ9NY25 188 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 HLA-DRB4X5D2U9 266 aa6.13□□□□□ -1.43
PSEN1-209ENST00000553855 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 H3BMM0 161 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 CXCL3P19876 107 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 ZNF266Q14584 549 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 GUK1Q16774 197 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 OR11H2Q8NH07 326 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 SMIM3Q9BZL3 60 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 WDR61Q9GZS3 305 aaKnown RBP6.12□□□□□ -1.43
PSEN1-209ENST00000553855 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-209ENST00000553855 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
PSEN1-209ENST00000553855 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 A0A087X0K7 114 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 AMBPP02760 352 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 TAS2R45P59539 299 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 RHOBP62745 196 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 PSG9Q00887 426 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 OXA1LQ15070 435 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 OR11H7Q8NGC8 314 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 TMEM37Q8WXS4 190 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
PSEN1-209ENST00000553855 EDA2RQ9HAV5 297 aa6.11□□□□□ -1.43
PSEN1-209ENST00000553855 TIMM9Q9Y5J7 89 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms