RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 SAV1Q9H4B6 383 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-226ENST00000553011 RPRMQ9NS64 109 aa10.34□□□□□ -0.75
PTCH1-226ENST00000553011 ARPC5O15511 151 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 SPRY2O43597 315 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 PYYP10082 97 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF266Q14584 549 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 LCN15Q6UWW0 184 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 RNF183Q96D59 192 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 SLC25A2Q9BXI2 301 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 HRH4Q9H3N8 390 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF331Q9NQX6 463 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-226ENST00000553011 TP53TG1Q9Y2A0 90 aa10.33□□□□□ -0.76
PTCH1-226ENST00000553011 A0A0J9YX75 114 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 SPP1P10451 314 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 CXCL2P19875 107 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 RPL7L1Q6DKI1 246 aaKnown RBP10.32□□□□□ -0.76
PTCH1-226ENST00000553011 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 OR11H4Q8NGC9 324 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
PTCH1-226ENST00000553011 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF586Q9NXT0 402 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 FUT9Q9Y231 359 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 TIMM9Q9Y5J7 89 aa10.32□□□□□ -0.76
PTCH1-226ENST00000553011 EIF3GO75821 320 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF705DP0CH99 300 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF705BP0CI00 300 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-226ENST00000553011 ATP6V0CP27449 155 aa10.31□□□□□ -0.76
PTCH1-226ENST00000553011 PSG3Q16557 428 aa10.31□□□□□ -0.76
PTCH1-226ENST00000553011 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-226ENST00000553011 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
PTCH1-226ENST00000553011 MFFQ9GZY8 342 aa10.31□□□□□ -0.76
PTCH1-226ENST00000553011 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
PTCH1-226ENST00000553011 HIST1H1EP10412 219 aaKnown RBP10.3□□□□□ -0.76
PTCH1-226ENST00000553011 FXYD7P58549 80 aa10.3□□□□□ -0.76
PTCH1-226ENST00000553011 RAB2AP61019 212 aa10.3□□□□□ -0.76
PTCH1-226ENST00000553011 GUK1Q16774 197 aa10.3□□□□□ -0.76
PTCH1-226ENST00000553011 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
PTCH1-226ENST00000553011 SH3BGRL3Q9H299 93 aa10.3□□□□□ -0.76
PTCH1-226ENST00000553011 hCG_2014768A0A024R1R8 64 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-226ENST00000553011 NDUFB4O95168 129 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 OR10J4P0C629 311 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 M6PRP20645 277 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 RHOBP62745 196 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-226ENST00000553011 BLNKQ8WV28 456 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 RPUSD4Q96CM3 377 aaKnown RBP10.29□□□□□ -0.76
PTCH1-226ENST00000553011 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 PSMG3Q9BT73 122 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-226ENST00000553011 PAXXQ9BUH6 204 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 SLC35B3Q9H1N7 401 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 OR51M1Q9H341 326 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 XCL2Q9UBD3 114 aa10.29□□□□□ -0.76
PTCH1-226ENST00000553011 BORCS7-ASMTA0A0B4J1R7 106 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 A8MTW9 85 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 OR7C2O60412 319 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
PTCH1-226ENST00000553011 NUTF2P61970 127 aaKnown RBP10.28□□□□□ -0.76
PTCH1-226ENST00000553011 PSG9Q00887 426 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-226ENST00000553011 TMEM41BQ5BJD5 291 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 CSNK1G2-AS1Q8NCQ2 148 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 OR8A1Q8NGG7 326 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 FXYD5Q96DB9 178 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 RARRES2Q99969 163 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 CYTL1Q9NRR1 136 aa10.28□□□□□ -0.76
PTCH1-226ENST00000553011 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 ZNF253O75346 499 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
PTCH1-226ENST00000553011 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 KCNRGQ8N5I3 272 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
PTCH1-226ENST00000553011 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 A0A0J9YWU9 116 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 M0R3E3 92 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 TAAR5O14804 337 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
PTCH1-226ENST00000553011 TAS2R45P59539 299 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 UBE2L3P68036 154 aaKnown RBP10.26□□□□□ -0.77
PTCH1-226ENST00000553011 PDE6HQ13956 83 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 ZNF345Q14585 488 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 KHDC3LQ587J8 217 aa10.26□□□□□ -0.77
PTCH1-226ENST00000553011 EXOC3-AS1Q8N2X6 119 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms