RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ACTL10Q5JWF8 245 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 PATE2Q6UY27 113 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 OR10J6PQ8NGY7 276 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 SMIM3Q9BZL3 60 aa7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 SAV1Q9H4B6 383 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-208ENST00000552890 KANTRA0A1W2PQU2 76 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 SOCS3O14543 225 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 ARPC5O15511 151 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 CA1P00915 261 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 CSN1S1P47710 185 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 LEMD1Q68G75 181 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 Q6ZNX1 250 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 TRPT1Q86TN4 253 aaKnown RBP7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 TCTE3Q8IZS6 198 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 ZNF738Q8NE65 137 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 RNF183Q96D59 192 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 ASCL2Q99929 193 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 PAXXQ9BUH6 204 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 OR51M1Q9H341 326 aa7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-208ENST00000552890 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 UMAD1C9J7I0 102 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 H3BMM0 161 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 OR7C2O60412 319 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 PFDN1O60925 122 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 NBEAP1P0C6P0 100 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 AKR1C8PQ5T2L2 129 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 AKAP14Q86UN6 197 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 KCNRGQ8N5I3 272 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 OR10G4Q8NGN3 311 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 OR10G9Q8NGN4 311 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 OR10G7Q8NGN6 311 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 RXFP4Q8TDU9 374 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 HYLS1Q96M11 299 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 CITED4Q96RK1 184 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 ARPC5LQ9BPX5 153 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 NKX6-2Q9C056 277 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 ACTR3CQ9C0K3 210 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 SELENOKQ9Y6D0 94 aa7.58□□□□□ -1.2
TRAFD1-208ENST00000552890 TRBV19A0A075B6N1 114 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 A0A0J9YX75 114 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 SMIM9A6NGZ8 99 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 HSD17B11Q8NBQ5 300 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 STOML3Q8TAV4 291 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 RNF141Q8WVD5 230 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 RPUSD4Q96CM3 377 aaKnown RBP7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 WFDC10AQ9H1F0 79 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 TMEM167BQ9NRX6 74 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
TRAFD1-208ENST00000552890 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 SERTM2A0A1B0GWG4 89 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 TMEM189A5PLL7 270 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 RNF222A6NCQ9 220 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 TEX46H3BTG2 121 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 MRPS12O15235 138 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 CXorf1O96002 111 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 MIFP14174 115 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 CDC34P49427 236 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 DPPA3Q6W0C5 159 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 OR4B1Q8NGF8 309 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 OR8A1Q8NGG7 326 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 LINC00477Q96M19 166 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 RARRES2Q99969 163 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 GOLT1BQ9Y3E0 138 aa7.56□□□□□ -1.2
TRAFD1-208ENST00000552890 TRBV7-9A0A0J9YWB2 115 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 A8MTW9 85 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 C3orf84H3BNL1 204 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 K7EQM0 130 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 C1QBP02746 253 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 NMBP08949 121 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 TPT1P13693 172 aaKnown RBP7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 RAB5CP51148 216 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 DEFB135Q30KP9 77 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 FAM24BQ8N5W8 94 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 CMTM2Q8TAZ6 248 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 SAT2Q96F10 170 aaPredicted RBP7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 ODF3Q96PU9 254 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 NEU1Q99519 415 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 WFDC1Q9HC57 220 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 RFNGQ9Y644 331 aa7.55□□□□□ -1.2
TRAFD1-208ENST00000552890 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 BCL2L11O43521 198 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 SLC25A5P05141 298 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 LEPP41159 167 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 PPT1P50897 306 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 LGALSLQ3ZCW2 172 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms