RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, human

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX54-208	ENST00000551344	ZNF705B	P0CI00	300 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	CXCL2	P19875	107 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	CXCL3	P19876	107 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	NHLH2	Q02577	135 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	BAX	Q07812	192 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	RNF182	Q8N6D2	247 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	PFDN5	Q99471	154 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	SLC35B3	Q9H1N7	401 aa		13.71	□□□□□ -0.21
DDX54-208	ENST00000551344	UBE2L5P	A0A1B0GUS4	154 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	C11orf94	C9JXX5	98 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	H2BFS	P57053	126 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	OPCML	Q14982	345 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	PSG3	Q16557	428 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	LRRC37A5P	Q49AS3	106 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	LCN15	Q6UWW0	184 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344	SLC39A9	Q9NUM3	307 aa		13.7	□□□□□ -0.22
DDX54-208	ENST00000551344		H0YIZ8	118 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	AMBP	P02760	352 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	FGF7	P21781	194 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	CNN1	P51911	297 aa	Known RBP	13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	B2M	P61769	119 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	AMTN	Q6UX39	209 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	ZNF738	Q8NE65	137 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	OR5C1	Q8NGR4	320 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	PPP1R1C	Q8WVI7	109 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	SLC50A1	Q9BRV3	221 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	OR5AC2	Q9NZP5	309 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	GOLT1B	Q9Y3E0	138 aa		13.69	□□□□□ -0.22
DDX54-208	ENST00000551344	TMEM189	A5PLL7	270 aa		13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	HLA-DMB	P28068	263 aa		13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	MORN5	Q5VZ52	161 aa		13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	LINC00476	Q8WZB0	136 aa		13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	PXMP4	Q9Y6I8	212 aa		13.68	□□□□□ -0.22
DDX54-208	ENST00000551344	IGHV3OR16-12	A0A075B7B8	117 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	TCTA	P57738	103 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	C1orf158	Q8N1D5	194 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	OR11H7	Q8NGC8	314 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	OR8A1	Q8NGG7	326 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	C2CD4C	Q8TF44	421 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	IGF2BP2-AS1	Q96M15	143 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	RNF126	Q9BV68	326 aa		13.67	□□□□□ -0.22
DDX54-208	ENST00000551344	PET100	P0DJ07	73 aa		13.66	□□□□□ -0.22
DDX54-208	ENST00000551344	IGLC2	P0DOY2	106 aa		13.66	□□□□□ -0.22
DDX54-208	ENST00000551344	GUK1	Q16774	197 aa		13.66	□□□□□ -0.22
DDX54-208	ENST00000551344	NPCDR1	Q9BY65	106 aa		13.66	□□□□□ -0.22
DDX54-208	ENST00000551344	RFNG	Q9Y644	331 aa		13.66	□□□□□ -0.22
DDX54-208	ENST00000551344	DNAH1	Q9P2D7	4330 aa		13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	TRAV5	A0A0B4J249	113 aa		13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	MPC2	O95563	127 aa		13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	LY6G6C	O95867	125 aa		13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	RPUSD4	Q96CM3	377 aa	Known RBP	13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	SAT2	Q96F10	170 aa	Predicted RBP	13.65	□□□□□ -0.22
DDX54-208	ENST00000551344	TRAV10	A0A0B4J240	114 aa		13.64	□□□□□ -0.23
DDX54-208	ENST00000551344		H3BQ15	152 aa		13.64	□□□□□ -0.23
DDX54-208	ENST00000551344	HBE1	P02100	147 aa		13.64	□□□□□ -0.23
DDX54-208	ENST00000551344	SNRPC	P09234	159 aa	Known RBP	13.64	□□□□□ -0.23
DDX54-208	ENST00000551344	HIST1H1A	Q02539	215 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX54-208	ENST00000551344	RYR2	Q92736	4967 aa		13.64	□□□□□ -0.23
DDX54-208	ENST00000551344	PLEC	Q15149	4684 aa	Known RBP	13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	CRX	O43186	299 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	PTTG1	O95997	202 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	SPART-AS1	P0CW21	52 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	RHOB	P62745	196 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	CLINT1	Q14677	625 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	SPINK13	Q1W4C9	94 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	C12orf74	Q32Q52	190 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344		Q6ZTC4	211 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	THAP6	Q8TBB0	222 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	TMEM208	Q9BTX3	173 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	WDR61	Q9GZS3	305 aa	Known RBP	13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	PPP1R14D	Q9NXH3	145 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	TMEM14C	Q9P0S9	112 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	CELA1	Q9UNI1	258 aa		13.63	□□□□□ -0.23
DDX54-208	ENST00000551344	BOLA2-SMG1P6	H3BVE0	249 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344		M0R2Z0	102 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344	ZNF253	O75346	499 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344	RRN3P1	Q2M238	152 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344	LGALS9C	Q6DKI2	356 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344	KCNIP2	Q9NS61	270 aa		13.62	□□□□□ -0.23
DDX54-208	ENST00000551344	TEX48	A0A1B0GUV7	120 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	IGLL5	B9A064	214 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344		H3BTX0	84 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	SLC17A3	O00476	420 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	INS	P01308	110 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	EMP1	P54849	157 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	ZNF586	Q9NXT0	402 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	HSPB11	Q9Y547	144 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	ALG5	Q9Y673	324 aa		13.61	□□□□□ -0.23
DDX54-208	ENST00000551344	C17orf112	F2Z3M2	114 aa		13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	HIST1H1E	P10412	219 aa	Known RBP	13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	RPL12	P30050	165 aa	Known RBP	13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	OR10J6P	Q8NGY7	276 aa		13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	ATP5S	Q99766	215 aa		13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	DKK2	Q9UBU2	259 aa		13.6	□□□□□ -0.23
DDX54-208	ENST00000551344	TRBV19	A0A075B6N1	114 aa		13.59	□□□□□ -0.23
DDX54-208	ENST00000551344	LOC102723971	A0A1B0GUV8	181 aa		13.59	□□□□□ -0.23
DDX54-208	ENST00000551344	PDE6H	Q13956	83 aa		13.59	□□□□□ -0.23
DDX54-208	ENST00000551344	GCSAML	Q5JQS6	135 aa		13.59	□□□□□ -0.23
DDX54-208	ENST00000551344	MBD2	Q9UBB5	411 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms