RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 MRPS12O15235 138 aaKnown RBP12.05□□□□□ -0.48
SCN8A-206ENST00000550891 OR5R1Q8NH85 324 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 GRAMD2BQ96HH9 432 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 C12orf57Q99622 126 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 SNURFLB1AK76 121 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 M0R3E3 92 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 CBLN1P23435 193 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 COX19Q49B96 90 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 ZNF331Q9NQX6 463 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-206ENST00000550891 A0A0G2JLM5 398 aa12.04□□□□□ -0.48
SCN8A-206ENST00000550891 TMEM183AQ8IXX5 376 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 DOPEY2Q9Y3R5 2298 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 SERTM2A0A1B0GWG4 89 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 CT45A10P0DMU9 189 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 MEOX2P50222 304 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
SCN8A-206ENST00000550891 GBGT1Q8N5D6 347 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 ZNF207O43670 478 aaKnown RBP12.03□□□□□ -0.48
SCN8A-206ENST00000550891 C19orf54Q5BKX5 351 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 PSG8Q9UQ74 426 aa12.03□□□□□ -0.48
SCN8A-206ENST00000550891 A8MWL6 223 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 DIRC3C9JPN6 131 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 PHOX2AO14813 284 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV3-11P01762 117 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 MT-ND6P03923 174 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 PSG3Q16557 428 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 CYB5R2Q6BCY4 276 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 MLST8Q9BVC4 326 aa12.02□□□□□ -0.48
SCN8A-206ENST00000550891 MRPL18Q9H0U6 180 aaKnown RBP12.02□□□□□ -0.48
SCN8A-206ENST00000550891 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.48
SCN8A-206ENST00000550891 PRSS57Q6UWY2 283 aa12.02□□□□□ -0.49
SCN8A-206ENST00000550891 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
SCN8A-206ENST00000550891 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 IZUMO1RA6ND01 250 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 BUB3O43684 328 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 CIARTQ8N365 385 aaPredicted RBP12.01□□□□□ -0.49
SCN8A-206ENST00000550891 TSKUQ8WUA8 353 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 PLA2G2AP14555 144 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 PPIFP30405 207 aaKnown RBP12.01□□□□□ -0.49
SCN8A-206ENST00000550891 C1orf194Q5T5A4 169 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 GFI1BQ5VTD9 330 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 SMIM6P0DI80 62 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
SCN8A-206ENST00000550891 ZNF253O75346 499 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 PRB4P10163 310 aaPredicted RBP12□□□□□ -0.49
SCN8A-206ENST00000550891 HIST3H2BBQ8N257 126 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 FABP4P15090 132 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 Q6ZS46 218 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 MBD6Q96DN6 1003 aa12□□□□□ -0.49
SCN8A-206ENST00000550891 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 OR4X2Q8NGF9 303 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 NEU1Q99519 415 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 TRBV6-1A0A0K0K1D8 114 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 OR2D3Q8NGH3 330 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 SLC50A1Q9BRV3 221 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 KLK15Q9H2R5 256 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 VPREB3Q9UKI3 123 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 BRI3O95415 125 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 HLA-DQA1P01909 254 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 CELSR2Q9HCU4 2923 aa11.99□□□□□ -0.49
SCN8A-206ENST00000550891 FBN2P35556 2912 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
SCN8A-206ENST00000550891 IGLV2-11P01706 119 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 PCP4L1A6NKN8 68 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 CHEK1O14757 476 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 CT83Q5H943 113 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 OR4B1Q8NGF8 309 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 NDFIP1Q9BT67 221 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 PRSS22Q9GZN4 317 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 IGKV2-40A0A087WW87 121 aaPredicted RBP11.98□□□□□ -0.49
SCN8A-206ENST00000550891 NDUFA4O00483 81 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 IGKV2D-40P01614 121 aaPredicted RBP11.98□□□□□ -0.49
SCN8A-206ENST00000550891 CRISP2P16562 243 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 SAPCD1Q5SSQ6 148 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 IGFL4Q6B9Z1 124 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 SMAD5-AS1Q9Y6J3 95 aa11.98□□□□□ -0.49
SCN8A-206ENST00000550891 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
SCN8A-206ENST00000550891 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
SCN8A-206ENST00000550891 NPFFR1Q9GZQ6 430 aa11.97□□□□□ -0.49
SCN8A-206ENST00000550891 CSMD1Q96PZ7 3565 aa11.97□□□□□ -0.49
SCN8A-206ENST00000550891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.97□□□□□ -0.49
SCN8A-206ENST00000550891 CLPSL1A2RUU4 121 aa11.97□□□□□ -0.49
SCN8A-206ENST00000550891 LINC00322Q6ZN03 302 aaPredicted RBP11.97□□□□□ -0.49
SCN8A-206ENST00000550891 CAMPP49913 170 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms