RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ZNF586Q9NXT0 402 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 SIGLEC8Q9NYZ4 499 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 SMAD5-AS1Q9Y6J3 95 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 A0A087X0K7 114 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 RBFOX3A6NFN3 312 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 MEOX2P50222 304 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 NDUFA5Q16718 116 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 TCF24Q7RTU0 167 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 BLNKQ8WV28 456 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 FAM210AQ96ND0 272 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
CACNB3-216ENST00000550391 RAB19A4D1S5 217 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 PAGE4O60829 102 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
CACNB3-216ENST00000550391 BCL2P10415 239 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 UBE2G2P60604 165 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
CACNB3-216ENST00000550391 PDE6HQ13956 83 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 HAGHQ16775 308 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 FAM90A2PQ658T7 463 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 COMMD7Q86VX2 200 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 C17orf77Q96MU5 243 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 MLXQ9UH92 298 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 VAX2Q9UIW0 290 aa10.66□□□□□ -0.7
CACNB3-216ENST00000550391 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 A0A1W2PRE2 83 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 FAM74A7A6NL05 159 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 H3BTX0 84 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 ZNF253O75346 499 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 PSG9Q00887 426 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 PEA15Q15121 130 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 ZNF506Q5JVG8 444 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 CST9LP1Q5W188 147 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.65□□□□□ -0.7
CACNB3-216ENST00000550391 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
CACNB3-216ENST00000550391 EIF5A2Q9GZV4 153 aaKnown RBP10.65□□□□□ -0.7
CACNB3-216ENST00000550391 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
CACNB3-216ENST00000550391 NDUFB4O95168 129 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 RANP62826 216 aaKnown RBP10.64□□□□□ -0.71
CACNB3-216ENST00000550391 DEFB114Q30KQ6 69 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 LYPD1Q8N2G4 141 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 RARRES2Q99969 163 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 TXNDC17Q9BRA2 123 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
CACNB3-216ENST00000550391 SAP30O75446 220 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 PAFAH1B2P68402 229 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 MEF2BQ02080 365 aaPredicted RBP10.63□□□□□ -0.71
CACNB3-216ENST00000550391 ICAM4Q14773 271 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 EIF4E3Q8N5X7 224 aaKnown RBP10.63□□□□□ -0.71
CACNB3-216ENST00000550391 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 Q9H3A6 140 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 SMDT1Q9H4I9 107 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 SELENOKQ9Y6D0 94 aa10.63□□□□□ -0.71
CACNB3-216ENST00000550391 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 TRAV25A0A0B4J276 109 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 PGPA6NDG6 321 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 C11orf94C9JXX5 98 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 SLC17A3O00476 420 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 ATP5G3P48201 142 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 SUMO1P63165 101 aaKnown RBP10.62□□□□□ -0.71
CACNB3-216ENST00000550391 UQCC3Q6UW78 93 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
CACNB3-216ENST00000550391 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 AAMDCQ9H7C9 122 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
CACNB3-216ENST00000550391 CLEC5AQ9NY25 188 aa10.62□□□□□ -0.71
CACNB3-216ENST00000550391 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
CACNB3-216ENST00000550391 TSPAN4O14817 238 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 NDUFS6O75380 124 aaKnown RBP10.61□□□□□ -0.71
CACNB3-216ENST00000550391 CD33P20138 364 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 CD81P60033 236 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
CACNB3-216ENST00000550391 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
CACNB3-216ENST00000550391 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 GBGT1Q8N5D6 347 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 WFDC9Q8NEX5 89 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 OR2K2Q8NGT1 345 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 TCEAL7Q9BRU2 100 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 MCRIP2Q9BUT9 160 aaKnown RBP10.61□□□□□ -0.71
CACNB3-216ENST00000550391 TREM1Q9NP99 234 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 PRELID1Q9Y255 219 aa10.61□□□□□ -0.71
CACNB3-216ENST00000550391 TRAV2A0A0B4J234 112 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 F6UZH7 168 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 ISLRO14498 428 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 SOCS3O14543 225 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 PDE6DO43924 150 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 TMEM61Q8N0U2 210 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 CMTM2Q8TAZ6 248 aa10.6□□□□□ -0.71
CACNB3-216ENST00000550391 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms