RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 CSTL1Q9H114 145 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 RETNQ9HD89 108 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 ZNF331Q9NQX6 463 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 RPRMQ9NS64 109 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 FUT9Q9Y231 359 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 TGP01266 2768 aa12.99□□□□□ -0.33
RAPGEF3-220ENST00000549347 AGRNO00468 2067 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 H3BQ15 152 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 ZNF253O75346 499 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 SPP1P10451 314 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 M6PRP20645 277 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 ACOT6Q3I5F7 207 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 GDF5OSQ5U4N7 250 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 MORN3Q6PF18 240 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 TP53TG1Q9Y2A0 90 aa12.98□□□□□ -0.33
RAPGEF3-220ENST00000549347 SLC17A3O00476 420 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 DEFB1P60022 68 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 RHOBP62745 196 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
RAPGEF3-220ENST00000549347 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 A0A0J9YX75 114 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 A8MTW9 85 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 JTBO76095 146 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 SNRPCP09234 159 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 PYYP10082 97 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 C4BPBP20851 252 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 SERF2P84101 59 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 DEFB135Q30KP9 77 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 LRRC20Q8TCA0 184 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 SH3BGRL3Q9H299 93 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
RAPGEF3-220ENST00000549347 TRBV19A0A075B6N1 114 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 F6UB75 175 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 H3BTX0 84 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 CA1P00915 261 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 RAB2AP61019 212 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 PDE6HQ13956 83 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 PSG3Q16557 428 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 TMEM41BQ5BJD5 291 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 RNF183Q96D59 192 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 ARPC5LQ9BPX5 153 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
RAPGEF3-220ENST00000549347 A0A0D9SG52 128 aa12.94□□□□□ -0.34
RAPGEF3-220ENST00000549347 TAS2R45P59539 299 aa12.94□□□□□ -0.34
RAPGEF3-220ENST00000549347 PAXXQ9BUH6 204 aa12.94□□□□□ -0.34
RAPGEF3-220ENST00000549347 SPRY2O43597 315 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR7C2O60412 319 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 NDUFB4O95168 129 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 MBP02144 154 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR10G9Q8NGN4 311 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 ZNF503Q96F45 646 aa12.93□□□□□ -0.34
RAPGEF3-220ENST00000549347 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 BCL2L11O43521 198 aa12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 FAM122CQ6P4D5 195 aa12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
RAPGEF3-220ENST00000549347 DUSP14O95147 198 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 C1QBP02746 253 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR10J4P0C629 311 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 PSG9Q00887 426 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 OR8A1Q8NGG7 326 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 BLNKQ8WV28 456 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 RPUSD4Q96CM3 377 aaKnown RBP12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 WWC2-AS2Q96NR7 200 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 EDA2RQ9HAV5 297 aa12.91□□□□□ -0.34
RAPGEF3-220ENST00000549347 A0A1B0GVG6 124 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 KANTRA0A1W2PQU2 76 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 TENM3Q9P273 2699 aa12.9□□□□□ -0.34
RAPGEF3-220ENST00000549347 EIF3GO75821 320 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms