RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 C16orf54Q6UWD8 224 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 C12orf54Q6X4T0 127 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 C1QL4Q86Z23 238 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 OR11H1Q8NG94 326 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 OR1N2Q8NGR9 330 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 GLMPQ8WWB7 406 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 EIF5A2Q9GZV4 153 aaKnown RBP6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 MANBALQ9NQG1 85 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 TMEM167BQ9NRX6 74 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 VAX2Q9UIW0 290 aa6.15□□□□□ -1.42
DEPDC4-207ENST00000549249 IGHV7-4-1A0A0J9YVY3 117 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 ZNF320A2RRD8 509 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 K7EMT4 169 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 SLC17A3O00476 420 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 CHEK1O14757 476 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 NDUFB4O95168 129 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 IFNA1P01562 189 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 NBEAP1P0C6P0 100 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 HIST1H1EP10412 219 aaKnown RBP6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 ADCYAP1P18509 176 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 ZP3P21754 424 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 MYCNOSP40205 109 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 PPT1P50897 306 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 FOXL1Q12952 345 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 AWAT1Q58HT5 328 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 ADAMTSL5Q6ZMM2 481 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 BPIFA4PQ86YQ2 179 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 STXBP6Q8NFX7 210 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 BLNKQ8WV28 456 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 DLX4Q92988 240 aaPredicted RBP6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 LINC00052Q96N35 136 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 TREM1Q9NP99 234 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 DAZ1Q9NQZ3 744 aaKnown RBP6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 ARL2-SNX15V9GYD0 113 aa6.14□□□□□ -1.43
DEPDC4-207ENST00000549249 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 A0A087X0K7 114 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 A0A1W2PRE2 83 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 C2orf70A6NJV1 201 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 C11orf94C9JXX5 98 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 CCL24O00175 119 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 MEF2BQ02080 365 aaPredicted RBP6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 PEA15Q15121 130 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 C1orf194Q5T5A4 169 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 CST9LP1Q5W188 147 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 S100A7AQ86SG5 101 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 NDUFA11Q86Y39 141 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 CCDC28AQ8IWP9 274 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 OR8I2Q8N0Y5 310 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 OR4F17Q8NGA8 305 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 DPF1Q92782 380 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 OR4F4Q96R69 305 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 CITED1Q99966 193 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 RHPN1-AS1Q9BWJ2 59 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 SMPXQ9UHP9 88 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 UFC1Q9Y3C8 167 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
DEPDC4-207ENST00000549249 TMEM218A2RU14 115 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 NDUFS6O75380 124 aaKnown RBP6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 SFTA3P0C7M3 94 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 S100A7P31151 101 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 TAGLN2P37802 199 aaKnown RBP6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 FAM90A2PQ658T7 463 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 SIGLEC15Q6ZMC9 328 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 CYB561D1Q8N8Q1 229 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 GPR82Q96P67 336 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 ELOVL1Q9BW60 279 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 Q9H3A6 140 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 RNF24Q9Y225 148 aa6.12□□□□□ -1.43
DEPDC4-207ENST00000549249 CSN3P07498 182 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 PRB4P10163 310 aaPredicted RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 FOLR2P14207 255 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 CBLN1P23435 193 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 HLA-DMBP28068 263 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 GALR1P47211 349 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 RANP62826 216 aaKnown RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 GNG5P63218 68 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 PDE6HQ13956 83 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 C10orf91Q5T1B1 145 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 EXOC3-AS1Q8N2X6 119 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 OR9G4Q8NGQ1 327 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 C11orf52Q96A22 123 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 NARS2Q96I59 477 aaKnown RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 TXNDC17Q9BRA2 123 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 SLC35B3Q9H1N7 401 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 ZNF331Q9NQX6 463 aaPredicted RBP6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 MLXQ9UH92 298 aa6.11□□□□□ -1.43
DEPDC4-207ENST00000549249 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 A0A1W2PS18 150 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 PGPA6NDG6 321 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 ZNF785A8K8V0 405 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 F6UZH7 168 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 TMEM250H0YL14 139 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms