RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 Q5VSD8 79 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 CSNK1G2-AS1Q8NCQ2 148 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 RNF126Q9BV68 326 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 OR5AC2Q9NZP5 309 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 DOK5Q9P104 306 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
PTCH1-217ENST00000548420 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.81
PTCH1-217ENST00000548420 PTTG1O95997 202 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 OR5G3P0C626 314 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 C4BPBP20851 252 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 CAMLGP49069 296 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 HBG1P69891 147 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 HBG2P69892 147 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 NHLH2Q02577 135 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 S100A7AQ86SG5 101 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 STX12Q86Y82 276 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 TMEM37Q8WXS4 190 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 UHRF2Q96PU4 802 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 RARRES2Q99969 163 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
PTCH1-217ENST00000548420 C11orf68Q9H3H3 251 aaKnown RBP10.02□□□□□ -0.81
PTCH1-217ENST00000548420 SAV1Q9H4B6 383 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-217ENST00000548420 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-217ENST00000548420 A0A087X0K7 114 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 A8MTW9 85 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 RPL7P18124 248 aaKnown RBP10.01□□□□□ -0.81
PTCH1-217ENST00000548420 RPL29P47914 159 aaKnown RBP10.01□□□□□ -0.81
PTCH1-217ENST00000548420 RAB31Q13636 194 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 SOHLH1Q5JUK2 328 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 SPATA31B1PQ5VZV4 182 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 FOXI2Q6ZQN5 318 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 OR11H2Q8NH07 326 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 PPP1R1CQ8WVI7 109 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
PTCH1-217ENST00000548420 TRAV8-2A0A0B4J237 113 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 ZNF705EA8MWA4 302 aaPredicted RBP10□□□□□ -0.81
PTCH1-217ENST00000548420 C11orf94C9JXX5 98 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 SSNA1O43805 119 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 MPC2O95563 127 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 P0DMU3 169 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 FAM231AP0DMU4 169 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 FAM231CP0DMU5 169 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 DEFB1P60022 68 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 MIC13Q5XKP0 118 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 ZNF503Q96F45 646 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 C16orf92Q96LL3 132 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 LINC00052Q96N35 136 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 SLC25A31Q9H0C2 315 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 DNAJC4Q9NNZ3 241 aa10□□□□□ -0.81
PTCH1-217ENST00000548420 A0A0J9YX75 114 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 MPDU1O75352 247 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 NUTF2P61970 127 aaKnown RBP9.99□□□□□ -0.81
PTCH1-217ENST00000548420 BAXQ07812 192 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 OPCMLQ14982 345 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 ALG5Q9Y673 324 aa9.99□□□□□ -0.81
PTCH1-217ENST00000548420 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 UBE2L5PA0A1B0GUS4 154 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 C10orf113Q5VZT2 155 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 Q6ZRG5 221 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 LYPD1Q8N2G4 141 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 ZNF709Q8N972 641 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 Q8NAQ8 132 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 X6R8D5 127 aa9.98□□□□□ -0.81
PTCH1-217ENST00000548420 F6UB75 175 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 COX7A2P2O60397 106 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 CXCL3P19876 107 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 FGF7P21781 194 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 B2MP61769 119 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 Q6ZTC4 211 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 OR1L4Q8NGR5 311 aa9.97□□□□□ -0.81
PTCH1-217ENST00000548420 PET100P0DJ07 73 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 MIFP14174 115 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 CXCL2P19875 107 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 XGP55808 180 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 FAM78BQ5VT40 261 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 IGFL4Q6B9Z1 124 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 EBLN2Q6P2I7 272 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 PFDN5Q99471 154 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 NPCDR1Q9BY65 106 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 CLEC5AQ9NY25 188 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms