RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 C9orf64Q5T6V5 341 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 LPCAT3Q6P1A2 487 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 DHRS4L2Q6PKH6 230 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 XKRXQ6PP77 449 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 TOMM20LQ6UXN7 152 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 SLC35E3Q7Z769 313 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 LYG2Q86SG7 212 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 SLC51BQ86UW2 128 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 BOD1L2Q8IYS8 172 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 SLC22A24Q8N4F4 322 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 CNEP1R1Q8N9A8 125 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 Q8WTZ3 238 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 CT55Q8WUE5 264 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 SKA2Q8WVK7 121 aaPredicted RBP0.32□□□□□ -2.36
CEP290-204ENST00000547926 PYDC1Q8WXC3 89 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 SLC35B4Q969S0 331 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 PPCDCQ96CD2 204 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 GPR146Q96CH1 333 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 MALSU1Q96EH3 234 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 ANKRD36BP1Q96IX9 119 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 CCDC42Q96M95 316 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 TMEM208Q9BTX3 173 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 TIPINQ9BVW5 301 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 COMMD5Q9GZQ3 224 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 PBOV1Q9GZY1 135 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 MED28Q9H204 178 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 FAM96AQ9H5X1 160 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 C19orf12Q9NSK7 152 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 MED29Q9NX70 200 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 DKKL1Q9UK85 242 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 PAIP2BQ9ULR5 123 aaKnown RBP0.32□□□□□ -2.36
CEP290-204ENST00000547926 CHD5Q8TDI0 1954 aa0.32□□□□□ -2.36
CEP290-204ENST00000547926 CRYBG1Q9Y4K1 1723 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TNCP24821 2201 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 IGKV3-7A0A075B6H7 116 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TRAV5A0A0B4J249 113 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TRAV38-1A0A0B4J264 116 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 IRGMA1A4Y4 181 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SMIM9A6NGZ8 99 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 FAM159BA6NKW6 160 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 PGRMC1O00264 195 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 NDUFC2O95298 119 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 ATP6V1G2O95670 118 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 FAM107AO95990 144 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 IFNA7P01567 189 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 IGHV1-69P01742 117 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TYMSP04818 313 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SERPINE1P05121 402 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SRP19P09132 144 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 RBP1P09455 135 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SULT1A3P0DMM9 295 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SULT1A4P0DMN0 295 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 KCNE1P15382 129 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SPI1P17947 270 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 RPS4Y1P22090 263 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 SPRR2DP22532 72 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 PPIBP23284 216 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 CLDN12P56749 244 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 RBM11P57052 281 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 FXYD7P58549 80 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TMEM258P61165 79 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 YPEL3P61236 119 aaPredicted RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 RANP62826 216 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 HLA-DRB3P79483 266 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 HPCAP84074 193 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 RPL19P84098 196 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 IFITM2Q01629 132 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 GNA12Q03113 381 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 FABP9Q0Z7S8 132 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 ITGB3BPQ13352 177 aaPredicted RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 TSNQ15631 228 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 NNATQ16517 81 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 LIN52Q52LA3 116 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 BRMS1LQ5PSV4 323 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 C1orf195Q5TG92 126 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SFXN4Q6P4A7 337 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 RPL22L1Q6P5R6 122 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 DCUN1D2Q6PH85 259 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SBSNQ6UWP8 590 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 ALKAL1Q6UXT8 129 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TAC4Q86UU9 113 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 COMMD7Q86VX2 200 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 CLVS1Q8IUQ0 354 aaPredicted RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 LRRC34Q8IZ02 419 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 RPP25LQ8N5L8 163 aaKnown RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 DEFB125Q8N687 156 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 OR1L8Q8NGR8 309 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 OR13C8Q8NGS7 320 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 OR10X1Q8NGY0 326 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SLC37A2Q8TED4 501 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 AP3S1Q92572 193 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 GNPNAT1Q96EK6 184 aaPredicted RBP0.31□□□□□ -2.36
CEP290-204ENST00000547926 TEX37Q96LM6 180 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 YPEL2Q96QA6 119 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 TSPAN32Q96QS1 320 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 GPER1Q99527 375 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 CCL13Q99616 98 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 SELENOSQ9BQE4 189 aa0.31□□□□□ -2.36
CEP290-204ENST00000547926 KIFC1Q9BW19 673 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms